Synteny amongst the S27 genome (left) and the PO212 genome (right). The scaffolds corresponding to the PO212 strain have been delineated in 13 different colours on the right and are labelled as in the genome assembly. The external track, situated in close proximity to the scaffolds, displays the quantity of telomeric repeats TTAGGGC. The scale utilised for quantifying the number of repeats ranges from 0 to 20, with the green-coloured line denoting seven repeats in each telomeric repeat search window/range. The grey bars represent a track indicating the number of repetitive elements in 120 kb ranges. On the left, the S27 scaffolds are linked to the PO212 scaffolds by lines representing regions of high sequence similarity. High sequence similarity regions have at least 30 consecutive genes homologous to PO212. In black are labelled those S27 scaffolds whose nt sequences are in the same direction as the aligned PO212 sequence, while those in white are in the inverted direction as the aligned PO212 sequence. Numerical labels indicate the nucleotide of the break junction between rearranged regions.