Research Article |
Corresponding author: Shi-Juan Wang ( sjwang@ahau.edu.cn ) Corresponding author: Cheng-Lin Hou ( chenglin-hou@cnu.edu.cn ) Academic editor: Robert Lücking
© 2025 Lan Zhuo, Hai-Qi Wang, Peng Zhang, Xiao-Nan Sui, Mei-Jun Guo, Shi-Juan Wang, Cheng-Lin Hou.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Zhuo L, Wang H-Q, Zhang P, Sui X-N, Guo M-J, Wang S-J, Hou C-L (2025) New genera and species of coniferous twig-inhabiting Rhytismatales from China. IMA Fungus 16: e138790. https://doi.org/10.3897/imafungus.16.138790
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Species in the order Rhytismatales M.E. Barr ex Minter (Leotiomycetes, Ascomycota) develop on a wide range of host plants, but prefer conifers, such as species of Cupressaceae and Pinaceae. Conifers, the largest group of gymnosperms, show a high diversity in China. In this study, the species diversity of Rhytismatales on twigs of conifers is investigated based on specimens newly collected in China. Morphological characteristics combined with multi-gene phylogenetic analysis (ITS, nrLSU, and mtSSU rDNA) revealed 18 new species, belonging to six new genera (Abiomyces, Cryptococcomyces, Labivalidus, Neotherrya, Pseudococcomyces, and Stipamyces) and three known genera (Hypoderma, Hypohelion, and Tryblidiopsis). Additionally, seven new combinations are proposed. The findings underscore the complexity of fungal taxonomy within Rhytismatales and the importance of considering multiple criteria for accurate classification. The study also explores the importance of host specificity for genus and species delimitation within the order. A key to genera and species of Rhytismatales on twigs of conifers worldwide is provided.
23 new taxa, Host organ specificity, Phylogeny, Taxonomy
The order Rhytismatales belongs to Leotiomycetes (Ascomycota). Species within Rhytismatales are widely distributed and have been recorded in Asia, Europe, North America, South America, and even the Arctic, with few reports from Africa (
Members of Rhytismatales on twigs of conifers are usually recorded as endophytes, for example Tryblidiopsis pinastri (Pers.) P. Karst. (
With approximately 615 extant species, conifers represent roughly two-thirds of the total gymnosperm species and constitute about 39% of the world’s forest cover (
For the present study, species diversity, taxonomy and phylogeny of species of Rhytismatales on twigs of conifers were investigated based on specimens recently collected in China. The phylogeny is reconstructed based on DNA sequences of multiple loci including the internal transcribed spacer (ITS) region, the large subunit nuclear ribosomal RNA gene (nrLSU), and the small subunit mitochondrial rDNA gene sequences (mtSSU). In the context of the present study, six new genera, 18 new species, and seven new combinations are proposed. Taxonomic positions of known species having molecular sequences are discussed. A key is provided for the identification of genera and species of Rhytismatales on conifers worldwide.
Fresh specimens were collected in China, mostly in Yunnan Province. Specimens were air-dried, placed in paper bags and stored in a cool, dry location in the laboratory for subsequent studies. Ascomata were cut from the twigs of conifers and disinfected in 75% ethanol for 30 s, followed by 10% sodium hypochlorite (NaOCl) for 3 min, washed in sterile water three times, then placed on Petri dishes containing potato dextrose agar (PDA) and incubated at room temperature (20 °C), hyphae emerging from the surface of the ascomata were isolated and subcultured on individual PDA plates. Living cultures of new species from this study were deposited in Capital Normal University Culture Collection Center (CNUCC) in China.
Mature ascomata were selected for morphological analyses. External shape, size, color, opening of the ascomata and conidiomata, as well as characteristics of zone lines and other details, were observed and photographed under a Nikon SMZ-1000 stereomicroscope (Japan). Color values were taken from ColorHexa (https://www.colorhexa.com/). For a detailed description of methods for morphological analysis, see
Genomic DNA was extracted from specimens and cultures with the M5 Plant Genomic DNA Kit (Mei5 Biotechnology Co., Ltd., China) following the manufacturer’s instructions. The ITS regions were amplified with PCR using the primers ITS1f/ITS4 (
The forward and reverse DNA sequences were aligned to generate consensus sequences using SeqMan v.7.1.0 in the DNASTAR Lasergene Core Suite software (DNASTAR Inc., Madison, WI, USA). The newly obtained sequences were submitted to the GenBank database, while additional ITS, nrLSU, and mtSSU rDNA sequences included in this study were downloaded from GenBank and UNITE (Suppl. material
By integrating multi-gene phylogenetic analysis (ITS, nrLSU, mtSSU) with morphological assessments, we investigated the phylogeny and taxonomic positions of Rhytismatales species collected from conifer twigs. The results reveal 18 new species, six new genera, and seven new combinations, emphasizing the rich fungal diversity associated with conifers.
Seventy new sequences were obtained for ITS rDNA, 61 for nrLSU rDNA, and 61 for mtSSU rDNA regions from newly collected specimens and their cultures. These new sequences were combined with corresponding sequences retrieved from GenBank (Suppl. material
The new sequence data of Rhytismatales species obtained in the context of this study are distributed across ten clades that can be considered as genera (Fig.
Phylogenetic tree derived from maximum likelihood analysis of combined ITS, nrLSU, and mtSSU rDNA sequences of Rhytismatales, using Cudoniella clavus (AFTOL-ID 166) and Pezicula carpinea (KUS-F51029) as outgroups. Bootstrap support values for ML analysis (MLB) and MP analysis (MPB) greater than 70% and Bayesian posterior probabilities (PP) greater than 0.95 are given above the nodes. Names of new species and a new combination are written in bold. Species name T – Type species; Species name H – Holotype.
A total of 18 new species have been found, with 12 of them belonging to the six newly described genera. These new species are Abiomyces laojunshanensis, Cryptococcomyces carbostomaticus, Cry. crystallinus, Cry. niger, Cry. occultus, Labivalidus cunninghamiae, Neotherrya catilliformis, N. circinate, N. nematoidea, N. pinicola, Pseudococcomyces yunnanensis, and Stipamyces massonianae. Additionally, one new species, Hypoderma cunninghamiicola, is assigned to the genus Hypoderma, one species, Hypohelion shennongjianum, to the genus Hypohelion, and four species, Tryblidiopsis changbaishanensis, Try. melanostroma, Try. multiseptata, and Try. yunnanensis, are introduced in Tryblidiopsis. Furthermore, several taxonomic reassignments are made based on the molecular phylogenetic evidence. Colpoma juniperi (P. Karst.) Dennis is reclassified from Colpoma to Cryptococcomyces. Lophodermium jianchuanense C.L. Hou & M. Piepenbr. is transferred from Lophodermium to Labivalidus. Therrya abieticola C.L. Hou & M. Piepenbr. is moved from Therrya to Neotherrya. Additionally, several species previously classified in Coccomyces are transferred into diverse genera: Coccomyces pinicola R.H. Lei & C.L. Hou to Stipamyces, Co. guizhouensis and Co. strobi J. Reid & Cain to Therrya, and Parvacoccum pini R.S. Hunt & A. Funk to Therrya. Based on molecular phylogenetic evidence, there are additional samples that represent unnamed species, which are not further described here as the ascomata of these specimens are not yet mature.
Referring to the type that growing on twigs of Abies.
This new genus is similar to Coccomyces De Not. on coniferous twigs and barks, but differs from Coccomyces by truncate acsi. Abiomyces is also similar to Therrya Sacc., but differs in having simple paraphyses, which do not form an epithecium, and aseptate ascospores.
Abiomyces laojunshanensis Lan Zhuo & C.L. Hou, described below.
Ascomata on twigs of Abies, scattered, round or slightly irregular, black (#000000), opening by radial or irregular splits to expose a yellow (#ffd400) to pale orange (#ffa500) hymenium. In median vertical section, ascomata intracortical. Lips absent. Covering stroma well developed. Basal Covering stroma poorly developed. Internal matrix of Covering stroma present, consisting of hyaline, thin-walled, angular cells with some irregular crystalloids and short hyphae. Subhymenium consisting of small, hyaline cells. Paraphyses filiform, simple. Asci clavate, thin-walled, J–, 8-spored. Ascospores aseptate, filiform, hyaline, without a gelatinous sheath.
Conidiomata and zone lines not seen.
Phylogenetically, the molecular sequences of species belonging to this new genus form a distinct lineage (Clade 3, Fig.
Morphologically, the ascomatal shape of A. laojunshanensis is similar to those of Coccomyces and Therrya that develop on twigs of conifers. Until now, 16 species of Coccomyces have been reported growing on coniferous twigs and bark (https://www.ars.usda.gov/). However, except for Co. mertensianae, other species in Coccomyces lacks apically truncate asci. Species of Therrya differ from A. laojunshanensis by apically inflated paraphyses embedded in gelatinous sheaths forming an epithecium and multi-septate ascospores (
Referring to the host genus Abies.
This new species is similar to Coccomyces mertensianae Sherwood, but Abiomyces laojunshanensis has longer, fili-fusiform ascospores.
CHINA, Yunnan Province, Lijiang, Laojunshan, 26.6310°N, 99.7227°E, alt. ca. 3930 m, on twigs of Abies georgei Orr (Pinaceae), 17 Aug 2023, C.L. Hou, L. Zhuo, and S.Y. Zhao, HOU 2070 (
Ascomata on twigs, scattered, not associated with pale areas. In surface view, ascomata subround or slightly irregular, 500–1250 × 750–1500 µm, black (#000000), erumpent from the bark, opening by radial splits to expose a yellow (#ffd400) to pale orange (#ffa500) hymenium. Lips absent. In median vertical section, ascomata intracortical. Covering stroma 30–50 μm thick near center of ascomata, not extending to the basal Covering stroma, consisting of an outer layer of remains of the host cortex and an inner layer of carbonized, angular to globose cells. Basal Covering stroma poorly developed, consisting of carbonized, angular to globose cells. Internal matrix of Covering stroma 375–470 µm thick, consisting of hyaline, thin-walled, angular cells with some irregular crystalloids and short hyphae. Subhymenium 40–60 µm thick, consisting of small, hyaline cells. Paraphyses aseptate, filiform, not branched, not swollen at tips, 130–150 × ca. 1 µm, covered by a thin gelatinous sheath. Asci ripening sequentially, clavate, apex truncate, 80–90 × 8–10 µm, stalked, thin-walled, J–, 8-spored. Ascospores aseptate, filiform to fusiform, 50–65 × 3 μm, hyaline, without a gelatinous sheath.
Conidiomata and zone lines not seen.
CHINA, Yunnan Province, Lijiang, Laojunshan, 26.6314°N, 99.7235°E, alt. ca. 3880 m, on twigs of Abies georgei, 17 Aug. 2023, C.L. Hou, L. Zhuo, and S.Y. Zhao, HOU 2064 (
Known only from Yunnan Province, China.
Morphologically, A. laojunshanensis resembles Coccomyces mertensianae growing on twigs of Tsuga mertensiana (Bong.) Carrière, however, Coccomyces mertensianae has septate paraphyses and shorter (19–25 × 2.5–3.0 µm), narrowly clavate ascospores. The multi-locus gene analysis indicates that the molecular sequences of A. laojunshanensis form an independent clade with high support (MLB = 100%, MPB = 100%, PP = 1.00). These sequences do not cluster with any species of Coccomyces, especially the type Co. tumidus (Fr.) De Not. Therefore, A. laojunshanensis is considered as a species new to science.
Abiomyces laojunshanensis on Abies georgei (HOU 2070/
CHINA, Yunnan Province, Lijiang, Laojunshan, 26.6323°N, 99.7252°E, alt. ca. 3880 m, on twigs of Abies georgei, 16 Jul. 2020, C.L. Hou, M.J. Guo, and Q.T. Wang, HOU 1608ZI (
In the multigene phylogenetic analysis, the molecular sequence of this specimen is closely related to A. laojunshanensis with strong support (MLB = 100%, MPB = 97%, PP = 1.00). The ITS rDNA sequence similarity of these two species is 94%. Unfortunately, ascomata could not be found for this species. Mature ascomata are necessary to clarify specific morphological features of the species.
Crypto (Latin) = hidden, referring to the hidden ascomata of the type and morphological similarity with species of the genus Coccomyces.
Species of this new genus are morphologically similar to some species of Coccomyces that inhabit coniferous twigs and bark, but are phylogenetically distant from the type of Coccomyces, Co. tumidus, which inhabits leaves, as shown in the phylogenetic tree.
Cryptococcomyces occultus Lan Zhuo & C.L. Hou, described below.
Ascomata on twigs of Juniperus spp., scattered, round, elliptical or slightly irregular, black (#000000) or concolorous with the surface of the substrate, opening by radial or irregular splits to expose a pale yellow (#ffff9d) to pale orange (#ffa500) hymenium. Lips absent. Ascomata intracortical. Covering stroma well developed. Basal Covering stroma absent or present, consisting of carbonized, thick-walled, angular to globose cells. Internal matrix of Covering stroma absent or present, consisting of hyaline, thin-walled, angular cells and short hyphae; in some species, the matrix is filled with crystals. Subhymenium flat or slightly depressed, consisting of hyaline textura porrecta. Paraphyses filiform, branched or not branched, not swollen at tips. Asci ripening sequentially, clavate, thin-walled, J–, 8-spored. Ascospores aseptate, filiform, hyaline, covered or not covered by a gelatinous sheath.
Conidiomata and zone lines not seen.
Phylogenetically, molecular sequence data obtained from specimens cited below for species of Cryptococcomyces cluster together with a sequence in GenBank labelled “Colpoma juniperi (P. Karst.) Dennis Lantz 395” with high support (MLB = 99%, PP = 0.97; Clade 1, Fig.
In addition, the round ascomata with radial or irregular openings of the species in the new genus resemble those of the genus Coccomyces rather than Colpoma (
Carbo- (Latin) = carbonized, -stoma (Latin) = opening, referring to strongly carbonized opening of ascomata.
This new species is similar to Cryptococcomyces niger, but differs by the presence of a basal Covering stroma and ascospores covered by a thick gelatinous sheath.
CHINA, Yunnan Province, Lijiang, Laojunshan, 26.6418°N, 99.7673°E, alt. ca. 3495 m, on twigs of Juniperus squamata D. Don (Cupressaceae), 16 Aug. 2023, C.L. Hou, L. Zhuo, and S.Y. Zhao, HOU 2025 (
Ascomata on twigs, erumpent from bark, scattered, not associated with pale areas. In surface view, ascomata round or slightly irregular, 1000–2000 × 750–1000 µm, black (#000000), opening by irregular splits to expose a yellow (#ffe562) hymenium. Lips absent. In median vertical section, ascomata intracortical. Covering stroma 100–175 μm thick near the center of ascomata, consisting of an outer layer of remains of the host cortex, an inner layer of carbonized, angular to globose cells, and an innermost layer of hyaline textura prismatica. Basal Covering stroma 25–35 µm thick, consisting of 3–7 μm diam., thick-walled, angular to globose cells. Internal matrix of Covering stroma 40–65 µm thick, consisting of hyaline, thin-walled, angular cells, filled with irregular crystals. Subhymenium 25–20 µm thick, consisting of hyaline textura porrecta. Paraphyses aseptate, filiform, not branched, curled or coiled at their tips, 130–145 × 1–1.5 µm, covered by a thin gelatinous sheath. Asci ripening sequentially, clavate, apex acute, 80–120 × 6–8 µm, thin-walled, J–, 8-spored. Ascospores aseptate, filiform, tapering towards the apex, 30–40 × 1–1.5 μm, hyaline, covered by a ca. 2 µm thick gelatinous sheath.
Conidiomata and zone lines not seen.
Known only from Yunnan Province, China.
The multi-locus gene analysis indicates that the sequences of Cry. carbostomaticus form a well-supported clade sister to the sequences of Cry. niger. Cryptococcomyces carbostomaticus is morphologically similar to Cry. niger, but the latter has a covering stroma without textura prismatica, no basal Covering stroma, and ascospores lack a thick gelatinous sheath. Therefore, Cry. carbostomaticus is considered to be a distinct species.
Cryptococcomyces carbostomaticus on Juniperus squamata (HOU 2025/
Crystallinus (Latin) = crystal, referring to the internal matrix of Covering stroma filled with numerous crystals.
This new species is similar to Cryptococcomyces niger, but differs by an internal matrix of the Covering stroma almost fully filled with crystals.
CHINA, Yunnan Province, Lijiang, Laojunshan, 26.6326°N, 99.7199°E, alt. ca. 3950 m, on twigs of Juniperus squamata (Cupressaceae), 17 Aug. 2023, C.L. Hou, L. Zhuo, and S.Y. Zhao, HOU 2082 (
Ascomata on twigs, erumpent from bark, scattered, not associated with pale areas. In surface view, ascomata round or slightly irregular, 1000–2000 × 750–1000 µm, black (#000000), opening by radial splits to expose a yellow (#ffd400) to pale orange (#ffa500) hymenium. Lips absent. In median vertical section, covering stroma 80–100 μm thick near the center of ascomata, consisting of an outer layer of carbonized, angular to globose cells and an inner layer of hyaline, thin-walled, angular to globose cells. Basal Covering stroma absent. Internal matrix of Covering stroma 240–260 µm thick, consisting of hyaline, thin-walled, angular cells, with abundant irregular crystals in the matrix. Subhymenium 15–20 µm thick, consisting of hyaline textura porrecta. Paraphyses aseptate, filiform, not branched, slightly curved at tips, 110–130 × 1–2 µm, covered by a thin gelatinous sheath. Asci ripening sequentially, clavate, apex acute, 85–105 × 7–8 µm, stalked, thin-walled, J–, 8-spored. Ascospores aseptate, filiform, tapering towards apex, 40–60 × 1–2 μm, hyaline, with a gelatinous cap.
Conidiomata and zone lines not seen.
CHINA, Yunnan Province, Lijiang, Laojunshan, 26.6319°N, 99.7252°E, alt. ca. 3860 m, on twigs of Juniperus squamata (Cupressaceae), 16 Aug. 2023, C.L. Hou, L. Zhuo, and S.Y. Zhao, HOU 2028 (
Known only from Yunnan Province, China.
The multi-locus gene analysis shows that the sequences of Cry. crystallinus form a well-supported clade sister to the sequences of Cryptococcomyces sp. 2. However, the specimens of Cryptococcomyces sp. 2 do not have any mature ascoma; therefore, these two species cannot be compared morphologically. The ITS rDNA sequence similarity between these two species is 92%, so we treat Cry. crystallinus as a separate species. Morphologically, Cry. crystallinus is similar to Cry. niger, but Cry. niger differs by an internal matrix of the Covering stroma lacking crystals.
Cryptococcomyces crystallinus on Juniperus squamata (HOU 2082/
Coccomyces juniperi P. Karst., Bidr. Känn. Finl. Nat. Folk 19: 254. 1871. Basionym.
= Colpoma juniperi (P. Karst.) Dennis, Kew Bull. [12](3): 401. 1958.
Finland, on bark of Juniperus communis L. (Cupressaceae), Fennia et Lapponia, collected throughout the year (exact date unknown), P. Karsten (A holotype needs to be designated).
Phylogenetically, a non-type sequence of Cry. juniperi clusters with other species of Cryptococcomyces, which also occur on Juniperus spp.
Niger (Latin) = black, referring to the black ascomata.
This new species is similar to Cryptococcomyces crystallinus, but differs by having an internal matrix of the Covering stroma without crystals.
CHINA, Yunnan Province, Lijiang, Laojunshan, 26.6322°N, 99.7250°E, alt. ca. 3880 m, on twigs of Juniperus squamata (Cupressaceae), 23 Jun. 2020, C.L. Hou, M.J. Guo, and Q.T. Wang, HOU 1625 (
Ascomata on twigs, scattered, not associated with pale areas. In surface view, ascomata elliptical to round, 800–1000 × 900–1200 µm, black (#000000), erumpent from bark, opening by radial splits to expose a pale yellow (#ffff9d) to yellow (#ffd400) hymenium. Lips absent. In median vertical section, ascomata intracortical. Covering stroma 110–125 μm thick near the center of the ascomata, not extending to the basal Covering stroma, consisting of an outer layer of remains of the host cortex, an inner layer of carbonized, angular to globose cells, and an innermost layer of hyaline angular cells embedded in the hyaline gelatinous matrix. Basal Covering stroma absent. Internal matrix of Covering stroma 90–110 µm thick, consisting of hyaline, thin-walled short hyphae in a gelatinous matrix. Subhymenium 20–30 µm thick, consisting of hyaline textura porrecta. Paraphyses aseptate, filiform, not branched, curled or coiled at tips, 125–150 × 1–2 µm, covered by a thin gelatinous sheath. Asci ripening sequentially, clavate, apex obtuse to acute, 72–95 × 6–8 µm, stalked, thin-walled, J–, 8-spored. Ascospores aseptate, filiform, tapering towards the apex, 30–40 × 1 μm, hyaline.
Conidiomata and zone lines not seen.
CHINA, Yunnan Province, Lijiang, Laojunshan, 26.6322°N, 99.7250°E, alt. ca. 3880 m, on twigs of Juniperus squamata (Cupressaceae), 26 Jul. 2024, C.L. Hou, L. Zhuo, and X.N. Sui, HOU 2303 (
Known only from Yunnan Province, China.
The multi-locus gene analysis indicates that the molecular sequences of Cry. niger form a well-supported clade sister to Cryptococcomyces carbostomaticus. Cry. carbostomaticus is distinguished by presence of a basal Covering stroma and textura prismatica on innermost layer of the covering stroma. Morphologically, Cry. niger is similar to Coccomyces petersii, and both of these two species occur on Juniperus spp. However, the covering stroma of Co. petersii is composed entirely of carbonized globose cells, whereas that of Cry. niger includes an innermost layer of hyaline angular cells embedded in a hyaline gelatinous matrix. Additionally, Co. petersii has larger asci (85–110 × 8–10 µm). The basal Covering stroma of Co. petersii is reduced to a subiculum of dark brown hyphae, while Cry. niger lacks a basal Covering stroma but possesses a well-developed internal matrix within the Covering stroma, consisting of hyaline hyphae.
Cryptococcomyces niger on Juniperus squamata (HOU 1625/
Occultus (Latin) = hidden, referring to the ascomata surface being concolorous with the surface of the substrate.
This new species is similar to Cryptococcomyces carbostomaticus, but differs by the absence of hyaline textura prismatica as innermost layer of the covering stroma.
CHINA, Yunnan Province, Kunming, Jiaozi Mountains, 26.0861°N, 102.8492°E, alt. ca. 3810 m, on twigs of Juniperus squamata (Cupressaceae), 23 Jun. 2021, C.L. Hou, M.J. Guo, and H. Zhou, HOU 1861A (
Ascomata on twigs, scattered, not associated with pale areas. In surface view, ascomata elliptical to round, 1600–2100 × 1400–2100 μm, concolorous with surface of substrate, erumpent through host epidermis, opening by irregular splits to expose pale yellow (#ffff9d) hymenium. Lips absent. In median vertical section, ascomata intracortical. Covering stroma 125–145 μm thick near the center of the ascomata, extending to the basal Covering stroma, consisting of an outer layer of remains of host cortex and an inner layer of carbonized, angular to globose cells. Excipulum present, formed by marginal paraphyses. Basal Covering stroma poorly developed, consisting of carbonized, angular to globose cells. Internal matrix of Covering stroma 95–130 µm thick, consisting of hyaline, thin-walled, angular cells and short hyphae embedded in gelatinous mucus. Subhymenium 20–30 µm thick, consisting of hyaline textura porrecta. Paraphyses aseptate, filiform, not branched, slightly curved at tips, 130–140 × 1–2 µm, covered by a thin gelatinous sheath. Asci ripening sequentially, clavate, apex obtuse to acute, 80–120 × 6–8 μm, stalked, thin-walled, J–, 8-spored. Ascospores aseptate, filiform, 30–40 × 1 μm, hyaline.
Conidiomata and zone lines not observed.
CHINA, Yunnan Province, Lijiang, Laojunshan, 26.6433°N, 99.7675°E, alt. ca. 3500 m, on twigs of Juniperus squamata (Cupressaceae), 16 Jul. 2020, C.L. Hou, M.J. Guo and Q.T. Wang, HOU 1613 (
Known only from Yunnan Province, China.
Phylogenetically, molecular sequences of Cry. occultus forms a distinct clade with high support values (MLB = 98%, MPB = 97%, PP = 1.00) together with the sequences of Cry. carbostomaticus, Cry. niger, and Cryptococcomyces sp. 1. However, the values of similarity of the ITS rDNA sequences of Cry. occultus with Cry. carbostomaticus, Cry. niger, and Cryptococcomyces sp. 1 are 97%, 96%, and 98%, respectively. Morphologically, Cry. niger differs from Cry. occultus by black, smaller (800–1000 × 900–1200 µm) ascomata, which protrude from the surface of the host; Cry. carbostomaticus differs from Cry. occultus by the presence of hyaline textura prismatica in the innermost layer of the covering stroma. Unfortunately, ascomata in the specimen of Cryptococcomyces sp. 1 are not mature enough to observe microscopic features. Cryptococcomyces occultus is morphologically similar to Coccomyces lijiangensis on Pinus armandii (Pinaceae), but Co. lijiangensis has a well-developed basal Covering stroma (900–1200 µm), and the internal matrix of the Covering stroma consists of hyaline hyphae and numerous crystals variable in shape and size. Therefore, based on phylogenetic and morphological differences, Cry. occultus is designated as a new species. It is the type of the genus Cryptococcomyces because it possesses the most typical traits of ascomata covered by bark.
CHINA, Yunnan Province, Lijiang, Laojunshan, 26.6413°N, 99.7672°E, alt. ca. 3500 m, on twigs of Juniperus sp. (Cupressaceae), 21 Jun. 2021, C.L. Hou, M.J. Guo, and H. Zhou, HOU 1835 (
In the multi-gene phylogenetic tree, the sequences of this undescribed species form a highly supported sister clade with the sequences of Cry. carbostomaticus and Cry. niger. The similarity of the ITS rDNA sequences of Cryptococcomyces sp. 1 with Cry. carbostomaticus and Cry. niger are 98% and 96%, respectively. As mature ascomata were not found in this specimen, it was not possible to conduct detailed morphological studies.
CHINA, Yunnan Province, Lijiang, Laojunshan, 26.6315°N, 99.7249°E, alt. ca. 3900 m, isolated from Juniperus sp. (Cupressaceae), 16 Aug. 2023, C.L. Hou, L. Zhuo, and S.Y. Zhao, CNUCC 2031A31; 26.6316°N, 99.7253°E, alt. ca. 3855 m, isolated from Juniperus sp., 21 Jun. 2021, C.L. Hou, M.J. Guo and H. Zhou, CNUCC 17821; 26.6319°N, 99.7243°E, alt. ca. 3890 m, isolated from Juniperus sp., 17 Aug. 2023, C.L. Hou, L. Zhuo, and S.Y. Zhao, CNUCC 2061B31.
In the multi-gene phylogenetic tree, the molecular sequences of this unnamed species cluster together with the molecular sequence of Cryptococcomyces crystallinus. The ITS rDNA similarity between these two species is 92%. It is worth noting that while processing other ascomata from these specimens, we obtained isolates of this species. However, the observed ascomata did not match the morphological characteristics of this genus. Since multiple isolates of this species were obtained from different specimens, sequencing errors or other potential mistakes have been ruled out. We hypothesize the presence of an undiscovered cryptic species, although no corresponding ascomata have yet been found.
Hypoderma rubi (Pers.) DC., in Lamarck & de Candolle, Fl. franç., Edn 3 (Paris) 2: 304. 1805.
Ascomata elliptical to elongated elliptical, black, opening by a longitudinal split, usually subcuticular. Covering stroma formed by mostly dark brown, thick-walled, angular cells, in still closed ascomata with a row of thin-walled, paler cells in the inner half of the wall, along the preformed line of dehiscence. Basal Covering stroma formed prior to the development of the covering stroma or of differentiated asci or paraphyses, comprising several layers of brown, thick-walled, angular cells. Subhymenium consisting of small cells or textura porrecta. Paraphyses filiform, branched or not branched, sometimes with swollen tips, usually coiled at the tips. Asci ripening sequentially, cylindrical to clavate, thin-walled, J–, 8-spored. Ascospores 0–1 septate, variable in shape, hyaline, usually covered by a gelatinous sheath.
Conidiomata
, when present, small, subcuticular, circular in outline when viewed from above, lenticular when viewed in vertical section. Upper wall present or not. Lower wall lined with cylindric, solitary conidiogenous cells which proliferate either sympodially or percurrently. Conidia small, not septate, hyaline (Description based on
Hypoderma is a large genus in Rhytismataceae and shares many morphological features with Lophodermium.
Referring to the host genus Cunninghamia.
This new species is similar to Hypoderma rubi (Pers.) De Not., but differs by a thicker covering stroma and a basal Covering stroma, longer asci and longer ascospores.
CHINA, Anhui Province, Yaoluoping National Nature Reserve, Dachuanling, alt. ca 800 m, on one year old twigs or needles of Cunninghamia lanceolata (Cupressaceae), 9 Sept. 2023, S.J. Wang, L. Zhen, X.Y. Li, and Y.L. Li, L4648 (
Ascomata on one-year twigs and needles, scattered, sometimes 2 to 3 clustered. In surface view, ascomata elliptical to elongated-elliptical, 750–1950 × 275–375 µm, dark brown (#2b180b) to black (#000000), sometimes dark brown in the center, gray (#787870) at the edge, shiny, with a conspicuous black perimeter line, opening by a single longitudinal split. Lips well developed, yellow-brown (#f2d98d). In median vertical section, ascomata subcuticular. Covering stroma 40–60 μm thick near the center of ascomata, gradually thinner towards the edge, connecting to the basal Covering stroma, consisting of an outer layer of host tissue, and an inner layer of dark brown, thick-walled textura angularis. Lips cells 3–4-septate, thin-walled, cylindrical, radially arranged, 20–28 × 3–4 µm, hyaline to yellow-brown. Basal Covering stroma 7–15 µm thick, consisting of carbonized, thick-walled, angular cells. Triangular space in vertical section between the covering stroma and the basal Covering stroma at the margin of the ascoma is filled with hyaline, thin-walled, angular cells. Subhymenium 5–15 µm thick, consisting of hyaline textura porrecta. Paraphyses filiform, sometimes branched, not swollen or slightly swollen at tips, 140–160 × 1–1.2 µm, covered by a thin gelatinous sheath. Asci ripening sequentially, clavate, apex subtruncate or rounded, 70–130 × 12–15 µm, thin-walled, J–, 8-spored. Ascospores aseptate, cylindrical, elliptical or cylindrical-clavate, 14–22 × 3.5–5 μm, hyaline, covered by a ca. 1 μm thick gelatinous sheath.
Conidiomata rounded or elliptical, brown (#48240a), slightly raising the substrate surface, opening by 1–2 ostioles. In median vertical section, conidiomata subcuticular. Upper wall absent. Basal wall poorly developed, black-brown, 3–5 μm thick, consisting of angular cells. Conidia and zone lines not seen.
CHINA, Anhui Province, Yaoluoping National Nature Reserve, Dachuanling, alt. ca. 800 m, on one year old twigs or needles of Cunninghamia lanceolata (Cupressaceae), 9 Sept. 2023, S.J. Wang, L. Zhen, X.Y. Li, and Y.L. Li, L4647 (
Known only from Anhui Province, China.
Phylogenetic analysis reveals that, with the exception of H. berberidis, H. minteri, H. caricis, and H. junipericola, other species of Hypoderma are divided into two distant clades. The sequences of the new species, along with several others, form a highly supported clade (MLB = 100%, MPB = 81%, PP = 0.99; Clade 9, Fig.
Hypohelion scirpinum (DC.) P.R. Johnst., Mycotaxon 39: 221. 1990.
Ascomata scattered to clustered, subcircular, elliptical or irregular, black, opening by an irregular longitudinal split. Covering stroma formed by dark brown (#2b180b) to black (#000000), thick-walled angular cells, more or less uniform in thickness. Basal Covering stroma absent or formed by carbonized, thick-walled angular cells. Subhymenium consisting of textura intricata. Paraphyses filiform, not branched, with swollen tips. Asci ripening sequentially, clavate, thin-walled, J–, 8-spored. Ascospores 0–1 septate, cylindrical, elliptical or slightly clavate, hyaline, covered by a gelatinous sheath.
Conidiomata
, when present, round, dark brown (#2b180b) to black (#000000), with a central ostiole. Conidiogenous cells cylindrical, tapering towards apex, hyaline. Conidia simple, oblong-elliptical to cylindrical, hyaline (Description based on
Hypohelion was established by
Referring to the name of the location in the Shennongjia forestry region where the type specimen was collected.
This new species is similar to Coccomyces anhuiensis T. Lv & C.L. Hou, but differs by intraepidermal ascomata and ascospores with an apical gelatinous cap, having 4–6 short filament-like appendage on the gelatinous cap.
CHINA, Hubei Province, Shennongjia forestry region, Muyuzhen, 31.4200°N, 110.4030°E, alt. ca. 1560 m, on twigs of Cunninghamia lanceolata (Lamb.) Hook. (Cupressaceae), 20 Jul. 2018, C.L. Hou & T. Lv. HOU 1342A (
Ascomata on young and dead twigs, scattered, not associated with pale areas. In surface view, ascomata wide elliptical to irregular elliptical, 650–950 × 350–500 µm, black (#000000), or black in the center and gray (#787870) towards the margin, shiny, with black perimeter line, opening by an irregular, longitudinal, 3-teethed split. Lips absent. In median vertical section, ascomata intraepidermal. Covering stroma 30–35 μm thick near the center of ascomata, extending to the basal Covering stroma, consisting of an outer layer of host cuticle and an inner layer of carbonized, thick-walled angular cells. Basal Covering stroma 15–20 µm thick, consisting of carbonized, thick-walled, angular cells. Triangular space visible in vertical section between the covering stroma and the basal Covering stroma at margin of ascoma filled with thin-walled angular, globose cells. Subhymenium 10–15 µm thick, consisting of hyaline textura intricata. Excipulum well-developed, formed by marginal paraphyses. Paraphyses aseptate, filiform, not branched, not swollen at tips, 120–140 × 1–2 µm. Asci ripening sequentially, clavate, apex bluntly pointed, 70–90 × 6–10 µm, thin-walled, J–, 8-spored. Ascospores aseptate, clavate, 35–45 × 2–3 μm, hyaline, multi-guttulate when immature, covered by thin gelatinous sheaths, with a gelatinous cap at the tip of mature ascospores, with 4–6 short filament-like appendages on each gelatinous cap.
see Notes. Zone lines infrequent, diffuse, black.
Known only from Hubei Province, China.
Based on the phylogenetic analysis, Hy. shennongjianum clusters with the type of the genus Hypohelion, Hy. scirpinum, as well as Hy. anhuiense, with weak support (Clade 5, Fig.
A probable asexual morph was observed in association with Hy. shennongjianum. The conidiomata are scattered, occasionally confluent, elliptical, reddish brown (#68271a), and 100–200 × 200–350 µm in size. In vertical section, the conidiomata are intraepidermal, 80–100 µm deep, with an upper layer 25–30 µm thick, composed of host cuticle and carbonized angular to globose cells, and a basal layer 15–18 µm thick, consisting of similar carbonized cells. Conidiogenous cells and conidia were not observed. Sequencing of the conidiomata was attempted but unsuccessful, so molecular data does not currently support the connection.
Hypohelion shennongjianum on Cunninghamia lanceolata (HOU 1342A /
Labium (Latin) = lip, validus (Latin) = strong, referring to the well-developed lips of ascomata.
This new genus is similar to Hypoderma, but differs from Hypoderma by broadly elliptical ascomata and filiform ascospores.
Labivalidus cunninghamiae Lan Zhuo & C.L. Hou, described below.
Ascomata often scattered, elliptical to broadly elliptical, black (#000000), opening by a single longitudinal split. Lips well-developed, creamy white(#fffeea). Ascomata intraepidermal. Covering stroma consisting of carbonized, thick-walled, angular to globose cells. Basal Covering stroma moderately to well developed, consisting of carbonized, thick-walled, angular to globose cells. Internal matrix of Covering stroma absent. Paraphyses filiform, not branched, not swollen or swollen at tips. Asci ripening sequentially, cylindrical, rostrate at apex at maturity, thin-walled, J–, 8-spored. Ascospores aseptate, filiform, hyaline, covered by a gelatinous sheath.
Conidiomata and zone lines not seen.
In the context of the present study, molecular data for the species described as Lophodermium jianchuanense have been obtained. Phylogenetic analyses shows that the molecular sequences of Lo. jianchuanense and the new species Labivalidus cunninghamiae (described below) form a distinct clade (Clade 10, Fig.
Morphologically, the ascomata of both Lo. jianchuanense and La. cunninghamiae have conspicuous, creamy-colored lips, which are similar to some species of the genus Hypoderma. However, species in the genus Hypoderma s. str. are usually saprotrophic, with a wide host range, their ascomata are often elliptical to elongate in shape, and ascospores elliptical to cylindrical (
Considering the phylogenetic and morphological evidence, it is necessary to establish a new genus to accommodate Lo. jianchuanense and La. cunninghamiae. Lophodermium jianchuanense is transferred to Labivalidus as a new combination, La. jianchuanensis.
Referring to the host genus Cunninghamia.
This new species is similar to Labivalidus jianchuanensis, but differs in having larger ascomata, larger ascospores, and paraphyses that are conspicuously swollen at their tips.
CHINA, Anhui Province, Anqing, Yuexi County, Wenao Forest Farm, 30.8050°N, 116.0885°E, alt. ca. 1020 m, on twigs of Cunninghamia lanceolata (Cupressaceae), 13 Apr. 2024, C.L. Hou, L. Zhuo, and X.N. Sui, HOU 2173A (
Ascomata on young dead twigs, scattered, sometimes 2–3 clustered. In surface view, ascomata elliptical to broadly elliptical, 900–1600 × 480–880 μm, black (#000000), opening by a longitudinal split. Lips well developed, creamy white (#fffeea). In median vertical section, ascomata intraepidermal. Covering stroma 50–90 μm thick near the center of the ascomata, extending to the basal Covering stroma, consisting of an outer layer of host cuticle, and an inner layer of carbonized, thick-walled, angular to globose cells. Lip cells septate, cylindrical, 6–10 × 2–4 μm, hyaline. Basal Covering stroma 20–30 µm thick, consisting of carbonized, thick-walled, angular to globose cells. A space triangular in vertical section between the covering stroma and the basal Covering stroma at the margin of the ascoma is filled with thin-walled, hyaline cells. Subhymenium 20–30 µm thick, consisting of textura intricata. Paraphyses filiform, not branched, conspicuously swollen to 2–3 μm diam. at their tips, 150–195 × 1 µm, covered by a thin gelatinous sheath. Asci ripening sequentially, cylindrical, with rostrate apex, 130–180 × 13–15 μm, thin-walled, J–, 8-spored. Ascospores aseptate, filiform, 100–125 × 3–4 μm, hyaline, covered by a 1–2 μm thick, gelatinous sheath.
Conidiomata and zone lines not seen.
CHINA, Anhui Province, Anqing, Yuexi County, Yaoluoping Nature Reserve, 30.8050°N, 116.0885°E, alt. ca. 1020 m, on twigs of Cunninghamia lanceolata (Cupressaceae), 13 Apr. 2024, C.L. Hou, L. Zhuo, and X.N. Sui, HOU 2166 (
Known only from Anhui Province, China.
In the phylogenetic tree, the molecular sequences of Labivalidus cunninghamiae form a clade sister to La. jianchuanensis. Labivalidus jianchuanensis differs from La. cunninghamiae by having smaller ascomata (500–750(–920) µm × 400–520 µm), smaller ascospores (65–90 µm × 1–1.5(–2) µm), and tips of paraphyses that are not swollen.
Lophodermium jianchuanense C.L. Hou & M. Piepenbr., Can. J. Bot. 83(1): 40. 2005. Basionym.
CHINA, Yunnan Province, Jianchuan, Laojunshan, alt. ca. 3400 m, on Juniperus formosana Hayata (Cupressaceae), 25 Jul. 2001, C.L. Hou, M. Piepenbring, Z.L. Yang, & R. Kirschner 104 (HMAS, holotype).
CHINA, Yunnan Province, Lijiang, Laojunshan, 26.6319°N, 99.7252°E, alt. ca. 3855 m, on needles and twigs of Juniperus squamata (Cupressaceae), 21 Jun. 2021, C.L. Hou, M.J. Guo, and H. Zhou, HOU 1781B (
Referring to the morphologically similar genus Therrya.
This new genus is similar to Therrya, but Neotherrya differs in having well-developed excipulum formed by marginal paraphyses, internal matrix of Covering stroma consisting of hyaline hyphae, and filiform, fusiform, or cylindrical ascospores.
Neotherrya circinata Lan Zhuo & C.L. Hou, described below.
Ascomata on twigs of conifers, scattered to clustered, circular, sessile, usually black, opening by irregular splits. Covering stroma formed by dark brown (#2b180b) to black (#000000), thick-walled angular cells. Basal Covering stroma usually present, consisting of carbonized, thick-walled, angular cells. Internal matrix of Covering stroma usually well developed, consisting of hyaline hyphae, filled or not filled with crystals. Subhymenium consisting of textura intricata or hyaline cells. Paraphyses filiform, not branched, with swollen tips. Asci ripening sequentially, clavate, thin-walled, J–, 8-spored or 4-spored. Ascospores mostly septate, filiform, fusiform or cylindrical, hyaline, covered or not covered by a gelatinous sheath.
Some of the morphological characteristics of members in Neotherrya are similar to those in Therrya, but species of Neotherrya differs by a well-developed excipulum formed by marginal paraphyses, an internal matrix of Covering stroma consisting of hyaline hyphae and cylindrical ascospores. Phylogenetic analyses shows that sequences of Neotherrya and Therrya form two separate clades. Sequences of Neotherrya (Clade 6, Fig.
Therrya abieticola C.L. Hou & M. Piepenbr., Mycotaxon 102: 168. 2007. Basionym.
CHINA, Yunnan Province, Laojunshan, alt. ca. 2400 m, on twigs of Abies sp. (Pinaceae), 25 Jul. 2001, C.L. Hou, M. Piepenbring, R. Kirschner, and Z.L. Yang 103 (
CHINA, Yunnan Province, Lijiang, Laojunshan, alt. ca. 3500 m, on twigs of Abies sp. (Pinaceae), 11 Jul. 2007, C.L. Hou, HOU 447.
Our phylogenetic analysis shows that sequences of Th. abieticola form a well-supported clade (MLB = 100%, MPB = 91%, PP = 1.00) together with sequences of N. nematoidea and are distantly related to type species of Therrya, Th. pini. Based on morphological characteristics and phylogenetic analyses, Th. abieticola is transferred here to the new genus Neotherrya. For a detailed description of this species see
Catilliformis (Latin) = plate-shaped, referring to the shape of ascomata.
This new species is distinguished from other Neotherrya species by lacking an internal matrix of the Covering stroma.
CHINA, Yunnan Province, Lijiang, Laojunshan, 26.6323°N, 99.7252°E, alt. ca. 3880 m, on twigs of Abies georgei (Pinaceae), 16 Jul. 2020, C.L. Hou, M.J. Guo, and Q.T. Wang, HOU 1608A (
Ascomata on twigs, slightly erumpent from the bark, scattered or aggregated, not associated with pale areas. In surface view, ascomata round to irregular, 550–950 × 350–750 µm, black (#000000), opening by irregular splits to expose an orange (#ffa500) hymenium. Lips absent. In median vertical section, covering stroma 20–40 μm thick near the center of ascomata, extending to the basal Covering stroma, consisting of an outer layer of carbonized, angular to globose cells and an inner layer of hyaline, angular to globose cells close to the opening. Excipulum well-developed, formed by marginal paraphyses. Basal Covering stroma 15–25 µm thick, easily separable from the hymenium layer when observed under the microscope, consisting of carbonized, thick-walled, angular cells. Internal matrix of Covering stroma absent. Subhymenium 25–30 µm thick, consisting of hyaline, globose cells. Paraphyses aseptate, filiform, not branched, swollen to 2–3 µm at tips, 130–150 × 1–2 µm, covered by a thin gelatinous sheath. Asci ripening sequentially, clavate, apex obtuse, 110–130 × 12–15 µm, thin-walled, J–, 4-spored. Ascospores 1–8-septate, cylindrical, 12–15 × 6–7 μm, hyaline, without gelatinous sheaths.
Conidiomata and zone lines not seen.
CHINA, Yunnan Province, Lijiang, Laojunshan, 26.6323°N, 99.7252°E, alt. ca. 3880 m, on twigs of Abies georgei (Pinaceae), 26 Jul. 2024, C.L. Hou, L. Zhuo, and X.N. Sui, HOU 2304 (
Known only from Yunnan Province, China.
In the phylogenetic tree, sequences of N. catilliformis form a well-supported clade (MLB = 100%, MPB = 97%, PP = 1.00) with N. circinata, but the latter has a well-developed internal matrix in the Covering stroma, a black epithecium formed by curled, coiled paraphyses, and 8-spored asci.
From circinatus (Latin) = to make round, referring to the curled tips of the paraphyses.
This new species is similar to Neotherrya catilliformis, but differs by its well-developed internal matrix of the Covering stroma, curled and coiled tips of paraphyses, and 8-spored asci.
CHINA, Yunnan Province, Lijiang, Laojunshan, alt. ca. 3800 m, on twigs of Abies georgei (Pinaceae), 25 Jun. 2011, C.L. Hou, HOU 883 (
Ascomata on twigs, slightly erumpent from bark, scattered, not associated with pale areas. In surface view, ascomata round to irregular, 800–1000 µm in diam., black (#000000), opening by irregular splits to expose a tangerine yellow (#ffb700) hymenium. Lips absent. In median vertical section, covering stroma 65–85 μm thick near the center of ascomata, extending to the basal Covering stroma, consisting of an outer layer of carbonized, angular cells and an inner layer of hyaline, angular cells. Excipulum well-developed, formed by marginal paraphyses. Basal Covering stroma 25–35 µm thick, consisting of an outer layer of carbonized, angular cells and an inner layer of hyaline, angular cells. Internal matrix of Covering stroma well-developed, consisting of hyaline hyphae, filled with irregular crystals. Subhymenium 10–15 µm thick, consisting of textura intricata. Paraphyses aseptate, filiform, not branched, curled and coiled, slightly swollen at their tips, forming the black epithecium, 110–140 × 2–2.5 µm. Asci ripening sequentially, clavate, apex obtuse, 75–125 × 10–17 µm, thin-walled, J–, 8-spored. Ascospores initially non-septate, with up to 7 septa when mature, cylindrical, acute at both ends, 23–38 × 2–4 μm, hyaline, covered by a 2–3 µm thick gelatinous sheath.
Conidiomata and zone lines not seen.
CHINA, Yunnan Province, Lijiang, Laojunshan, 26.6317°N, 99.7250°E, alt. ca. 3280 m, on twigs of Abies georgei (Pinaceae), 17 Jul. 2021, C.L. Hou, M.J. Guo, and Q.T. Wang, HOU 1587 (
Known only from Yunnan Province, China.
Phylogenetically, sequences of Neotherrya circinata form a well-supported clade (MLB = 100%, MPB = 97%, PP = 1.00) with N. catilliformis, but the latter lacks an internal matrix of the Covering stroma and has 4-spored asci. Morphologically, the new species is similar to Neotherrya nematoidea, but N. nematoidea has well- developed periphysoids, and nematode-like ascospores.
Nematoidea (Latin) = nematode-like, refers to the shape of the released ascospores.
This new species is distinguished from Neotherrya abieticola by N. nematoidea having filiform ascospores with 1–3-septa.
CHINA, Yunnan Province, Lijiang, Laojunshan, 26.6323°N, 99.7252°E, alt. ca. 3880 m, on twigs of Abies georgei (Pinaceae), 16 Jul. 2020, C.L. Hou, M.J. Guo, and Q.T. Wang, HOU 1598B (
Ascomata on twigs, erumpent from bark, scattered, not associated with pale areas. In surface view, ascomata round to irregular, 750–1000 µm, black (#000000), opening by irregular splits to expose a pale yellow (#ffff9d) hymenium. Lips absent. In median vertical section, covering stroma 40–60 μm thick near the center of ascomata, extending to the basal Covering stroma, consisting of carbonized, angular to globose cells. Periphysoids present. On inner surface of thecovering layer close to opening, a layer formed by periphysoids embedded in gelatinous matrix. Excipulum well-developed, formed by marginal paraphyses. Basal Covering stroma absent. Internal matrix of Covering stroma well-developed, consisting of hyaline hyphae and angular to globose cells. Subhymenium 15–25 µm thick, consisting of hyaline, angular cells. Paraphyses aseptate, filiform, not branched, swollen to 2–3 µm diam. at tips, 160–190 × 1–2 µm, covered by a thin gelatinous sheath. Asci ripening sequentially, clavate, apex obtuse, 110–170 × 10–13 µm, thin-walled, J–, 4-spored. Ascospores 1–3-septate, usually 3-septate, with shapes of nematode, tapering at both ends, 65–100 × 2–3 μm, hyaline, without gelatinous sheaths.
Conidiomata and zone lines not seen.
CHINA, Yunnan Province, Lijiang, Laojunshan, 26.6323°N, 99.7252°E, alt. ca. 3880 m, on twigs of Abies georgei (Pinaceae), 26 Jul. 2024, C.L. Hou, L. Zhuo, and X.N. Sui, HOU 2305 (
Known only from Yunnan Province, China.
Neotherrya nematoidea is closely related to N. abieticola in the phylogenetic tree, but N. abieticola has fusiform ascospores that are much shorter (30–50 × 2.5–4.5 µm) than the ascospores of N. nematoidea (65–100 × 2–3 μm) and lacks periphysoids.
Neotherrya nematoidea on Abies georgei (HOU 1598B /
Referring to the host genus Pinus.
This new species is distinguished from other Neotherrya species by its aseptate, cylindrical ascospores.
CHINA, Yunnan Province, Lijiang, Shangri-la, Bilahai, alt. ca. 3540 m, on twigs of Pinus densata Mast. (Pinaceae), 27 Jun. 2011, C.L. Hou, HOU 919 (
Ascomata on twigs, erumpent from bark, scattered, not associated with pale areas. In surface view, ascomata round to irregular, 480–900 µm, dark gray (#373737) to dark brown (#2b180b), opening by irregular splits to expose a black (#000000) hymenium. Lips absent. In median vertical section, covering stroma 40–60 μm thick near the center of ascomata, extending to the basal Covering stroma, consisting of the outer remains of the epidermis with the cuticle, an inner layer of carbonized, thick-walled, angular to globose cells, and an innermost layer of hyaline, angular cells. Excipulum well-developed, formed by marginal paraphyses. Basal Covering stroma 8–10 μm thick, consisting of dark brown hyphae and carbonized, thick-walled angular cells. Internal matrix of Covering stroma well-developed, consisting of hyaline, short hyphae. Subhymenium 10–15 µm thick, consisting of textura intricata. Paraphyses aseptate, filiform, not branched, swollen to 3–7 µm at their tips, agglutinated to form a dark epithecium, 120–165 × 2–2.5 µm, covered by a thin gelatinous sheath. Asci ripening sequentially, clavate, apex obtuse-rounded, 100–150 × 8–11 µm, thin-walled, J–, 8-spored. Ascospores aseptate, cylindrical to fusiform, tapering at both ends, 65–100 × 2–3 μm, hyaline, pluriguttulate, without gelatinous sheaths.
Conidiomata and zone lines not seen.
Known only from Yunnan Province, China.
In the phylogenetic tree, Neotherrya pinicola is closely related to four species, N. abieticola, N. catilliformis, N. circinata, and N. nematoidea. These five species form a clade with high support values (MLB = 100%, MPB = 100%, PP = 1.00). Morphologically, N. pinicola has sessile ascomata with a well-developed excipulum like the other four species. Based on the phylogenetic analysis and morphological characteristics, N. pinicola should be placed in the genus Neotherrya. Neotherrya pinicola differs from the other four species by the cylindrical to fusiform, aseptate ascospores. Therefore, N. pinicola is proposed as a distinct species.
Referring to morphologically similar species of Coccomyces.
This new genus is similar to Coccomyces, but lacks a basal Covering stroma.
Pseudococcomyces yunnanensis Lan Zhuo & C.L. Hou, described below.
Ascomata on twigs of Larix sp., erumpent from bark, scattered, round or slightly irregular, surface wrinkled, black (#000000), opening by radial or irregular splits. In median vertical section, covering stroma well developed. Basal Covering stroma absent. Internal matrix of Covering stroma present, consisting of hyaline, thin-walled, interwoven hyphae. Subhymenium consisting of thin-walled, angular cells. Paraphyses filiform, coiled, interwoven at their tips. Asci clavate, thin-walled, J–, 8-spored. Ascospores aseptate, filiform, hyaline, covered by a thick gelatinous sheath.
Conidiomata and zone lines not seen.
Based on the phylogenetic analysis, sequences of Pseudococcomyces form a well-supported clade (MLB = 100%, MPB = 99%, PP = 1.00; Clade 8, Fig.
Referring to the name of the province (Yunnan) where the specimen was collected.
This new species is similar to Coccomyces irretitus Sherwood, but Pseudococcomyces yunnanensis has paraphyses that are coiled, interwoven at their tips and lacks interwoven hyaline periphysoids.
CHINA, Yunnan Province, Lijiang, Laojunshan, 26.6434°N, 99.7676°E, alt. ca. 3930 m, on twigs of Larix speciosa W. C. Cheng & Y. W. Law (Pinaceae), 16 Jul. 2020, C.L. Hou, M.J. Guo, and H. Zhou, HOU 1574 (
Ascomata on twigs, erumpent, scattered, not associated with pale areas. In surface view, ascomata round to irregularly elongate, 750–1000 µm diam., black (#000000), erumpent from bark, opening by radial splits to expose a yellow (#ffd400) hymenium. Lips absent. In median vertical section, covering stroma 50–70 μm thick near the center of the ascomata, not extending to the base, consisting of an outer layer of remains of the host cortex, an inner layer of carbonized, angular to globose cells, and an innermost layer of pigmented angular to globose cells. Basal Covering stroma absent. Internal matrix of Covering stroma 250–300 µm thick, consisting of hyaline, thin-walled, angular cells and interwoven short hyphae. Subhymenium 30–50 µm thick, consisting of thin-walled, angular cells. Paraphyses aseptate, filiform, strongly circinate, not swollen at tips, 145–160 × ca. 1 µm. Asci ripening sequentially, clavate, apex bluntly pointed, 105–155 × 12–18 µm, stalked, thin-walled, J–, 8-spored. Ascospores aseptate, filiform-clavate, tapering towards base, 40–55 × 1–2 μm, hyaline, covered by a 3–5 μm thick gelatinous sheath.
Conidiomata and zone lines not seen.
CHINA, Yunnan Province, Lijiang, Laojunshan, 26.6434°N, 99.7676°E, alt. ca. 3930 m, on twigs of Larix speciosa (Pinaceae), 26 Jul. 2024, C.L. Hou, L. Zhuo, and X.N. Sui, HOU 2306 (
Known only from Yunnan Province, China.
In the phylogenetic tree, the sequences of P. yunnanensis form a distinct clade. Morphologically, P. yunnanensis is closely related to Co. irretitus; because both species grow on twigs of Larix spp. However, Co. irretitus has branched, netlike interwoven hyaline periphysoids immersed in a gel at the inner side of the covering stroma, and the tips of its paraphyses are weakly circinate (
Stipa- from stipes (Latin) = stalk, referring to the stalked ascomata.
This new genus is similar to Tryblidiopsis, but differs in having aseptate ascospores.
Stipamyces pinicola (R.H. Lei & C.L. Hou) Lan Zhuo & C.L. Hou
Ascomata on twigs of Pinus spp., erumpent, stalked, scattered or aggregate, round or slightly irregular, black, opening by irregular splits. In median vertical section, covering stroma well developed. Basal Covering stroma absent. Internal matrix of Covering stroma present, consisting of hyaline, thin-walled, interwoven hyphae. Subhymenium consisting of small, hyaline cells. Paraphyses filiform, circinate at tips. Asci clavate, thin-walled, J–, 8-spored. Ascospores aseptate, long-fusiform, hyaline, not covered by a thick gelatinous sheath.
Conidiomata and zone lines not seen.
Based on the phylogenetic analysis, the molecular sequences of Stipamyces spp. form a well-supported clade (MLB = 100%, MPB = 82%, PP = 1.00; Clade 7, Fig.
Referring to the host, Pinus massoniana Lamb. (Pinaceae).
This new species is similar to Stipamyces pinicola, but the ascomata of Stipamyces massonianae have longer stalks, and paraphyses are sometimes branched at their tips.
CHINA, Anhui Province, Anqing, Yuexi County, alt. ca. 1000 m, on twigs of Pinus massoniana, 20 Apr. 2015, C.L. Hou, HOU 1215 (
Ascomata on twigs, aggregated in groups of two to five, not associated with pale areas. In surface view, ascomata round to irregular, 875–1925 µm in diam., 1000–1600 µm high, black (#000000), erumpent from bark, opening by irregular splits to expose a yellow (#ffd400) hymenium. Lips absent. In median vertical section, covering stroma 30–50 μm thick near the center of the ascomata, extending to the base, consisting of an outer layer of remains of the host cortex, an inner layer of carbonized, angular cells, and an innermost layer of hyaline angular cells. Periphysoids on the inner surface of thecovering layer close to the opening, another layer formed by paraphysoids embedded in a gelatinous matrix. Basal Covering stroma absent. Internal matrix of Covering stroma well-developed, consisting of hyaline, interwoven hyphae. Subhymenium 65–80 µm thick, consisting of small, hyaline cells. Paraphyses aseptate, filiform, circinate, sometimes branched at tips, 100–145 × ca. 1 µm. Asci ripening sequentially, clavate, slightly truncate at the apex, 40–130 × 4–14 µm, stalked, thin-walled, J–, 8-spored. Ascospores aseptate, long-fusiform, acute at both ends, 25–40 × 2–4 μm, hyaline, not covered by a gelatinous sheath.
Conidiomata and zone lines not seen.
Known only from Anhui Province, China.
The phylogenetic analysis shows that S. massonianae is congeneric with S. pinicola, but the latter has shorter stalks on ascomata, a thinnercovering layer, and unbranched tips of paraphyses. The sequence similarity of ITS rDNA between these species is 93%, indicating that S. massonianae is a distinct species.
Stipamyces massonianae on Pinus massoniana (HOU 1215/
Coccomyces pinicola R.H. Lei & C.L. Hou, Mycotaxon 123: 125. 2013. Basionym.
CHINA, Yunnan Province, Lijiang, Tiejiashan, alt. ca. 2000 m, on twigs of Pinus armandii (Pinaceae), 11 Jul. 2007, C.L. Hou, HOU 486A (
CHINA, Anhui Province, Yuexi, Miaodaoshan, on twigs of Pinus taiwanensis Hayata (Pinaceae), 11 Jul. 2007, C.L. Hou, HOU 538 (
Therrya pini (Alb. & Schwein.) Höhn., Ber. dt. bot. Ges. 35: 422. 1917.
Ascomata scattered to clustered, circular to slightly irregular, sessile, dark brown to black, opening by irregular splits. Covering stroma formed by dark brown (#2b180b) to black (#000000), thick-walled angular cells. Epithecium present or absent. Basal Covering stroma poorly or well developed, consisting of carbonized, thick-walled, angular cells. Internal matrix of Covering stroma well developed, formed by thin-walled, irregular cells or hyaline hyphae, filled or not filled with crystals. Subhymenium consisting of textura intricata or hyaline cells. Paraphyses filiform, not branched, tips swollen or not swollen. Asci ripening sequentially, clavate, thin-walled, J–, 8-spored or 4-spored. Ascospores aseptate to septate, filiform or fusiform, hyaline, covered or not covered by a gelatinous sheath.
Conidiomata
scattered or gregarious, lenticular, 300–500 μm in diam, dark brown to black, ostiole absent, opening by irregular tears in thecovering layer. In vertical section, conidiomata subepidermal, upper layer and basal layer 20–60 μm thick, consisting of pale to dark brown textura angularis, with thin- to thick-walled cells. Conidiogenous cells smooth, cylindrical to ampuliform, discrete, holoblastic, sympodial to synchronous, 9–11.5(–13) × 2–2.5 μm. Conidia aseptate, hyaline, smooth, cylindrical, straight to curved, with rounded apices, 8–12(–22) × 1–1.5(–2) μm (Description based on
Reid and Cain (
Coccomyces guizhouensis Y.R. Lin & B.F. Hu, in Lin, Liu, Tang & Hu, Acta Mycol. Sin. 13(1): 8. 1994. Basionym.
CHINA, Guizhou Province, Zhijin, alt. ca. 1700 m, on twigs of Pinus armandii Franch. (Pinaceae), 2 May 1979, B.F. Hu 16393 (ACAFP 66501, holotype).
Parvacoccum pini R.S. Hunt & A. Funk, Mycotaxon 33: 52. 1988. To avoid a homonym with Therrya pini (Alb. & Schwein.) Höhn.
CANADA, B.C., Mesachie Lake, on branches of Pinus monticola Douglas ex D.Don (Pinaceae) killed by blister rust, 20 Jun. 1986, R.S. Hunt, DAVFP 23420 (holotype).
Therrya pinicola differs from Therrya pini by distinct molecular sequence data and morphologically by short, aseptate ascospores.
This is the first record of Therrya pinicola for China and on the new host Pinus pumila (Pall.) Regel.
CHINA, Heilongjiang Province, Yichun, Xing’anling Arboretum, 47.7474°N, 128.8899°E, alt. ca. 300 m, on twigs of Pinus pumila (Pinaceae), 16 Jun. 2024, C.L. Hou, L. Zhuo, and Y. Gao, HOU 2237 (
Coccomyces strobi J. Reid & Cain, Can. J. Bot. 39(5): 1127. 1961. Basionym.
CANADA, Ontario, Simcoe County, Midhurst, on Pinus strobus L. (Pinaceae), 4 Jun. 1951, R.F. Cain, TRTC 23,578 (holotype).
Tryblidiopsis pinastri (Pers.) P. Karst., Bidr. Känn. Finl. Nat. Folk 19: 262. 1871.
Ascomata
scattered to clustered, circular, stalked, black, opening by irregular splits. Covering stroma formed by dark brown (#2b180b) to black (#000000), thick-walled angular cells. Basal Covering stroma usually absent. Internal matrix of Covering stroma well developed, formed by hyaline, branched, septate hyphae embedded in gelatinous matrix, filled or not filled with crystals. Subhymenium consisting of textura intricata. Paraphyses filiform, branched or not branched, with slightly swollen tips. Asci ripening sequentially, cylindrical to clavate, thin-walled, J–, 8-spored or 4-spored. Ascospores 0–6 septate, filiform, fusiform to clavate, hyaline, covered by a gelatinous sheath (Description based on
Referring to the name of the location (Changbaishan) where the type specimen was collected.
This new species is similar to Tryblidiopsis sinensis, but differs by having a brown covering stroma, curved ascospores, and tips of paraphyses strongly swollen to 3–5 µm.
CHINA, Jilin Province, Yanbian Chaoxianzu Autonomous Prefecture, Antu County, Changbaishan, 42.0867°N, 128.0745°E, alt. ca. 1600 m, on twigs of Picea jezoensis var. komarovii (V. N. Vassil.) W. C. Cheng & L. K. Fu (Pinaceae), 14 Jun. 2024, C.L. Hou, L. Zhuo, and Y. Gao, HOU 2210 (
Ascomata on twigs, erumpent from bark, scattered, not associated with pale areas. In surface view, ascomata round to elliptical, 1000–1450 × 800–1250 µm, as seen from the side 600–800 µm high, brown (#48240a) to dark brown (#2b180b), opening by irregular splits to expose a yellow (#ffe562) hymenium. Lips absent. In median vertical section, covering stroma 40–60 μm thick near center of ascomata, consisting of an outer layer of carbonized, angular to globose cells and an inner layer of hyaline, angular to globose cells. Basal Covering stroma 5–7 µm thick, located between the subhymenium and the internal matrix of the Covering stroma, consisting of brown to dark brown globose cells. Internal matrix of Covering stroma well-developed, consisting of hyaline, thin-walled, gelatinous cells and hyaline hyphae, mixed with irregular crystals. Subhymenium 15–20 µm thick, consisting of textura intricata and hyaline, angular to globose cells. Paraphyses aseptate, filiform, not branched, swollen to 3–5 µm at tips, 120–140 × 2 µm. Asci ripening sequentially, clavate, apex obtuse, 110–120 × 15–22 µm, thin-walled, J–, 8-spored. Ascospores aseptate, curved fusiform, 16–25 × 4–5 μm, hyaline, covered by a 3–4 µm thick gelatinous sheath.
Conidiomata and zone lines not seen.
CHINA, Jilin Province, Yanbian Chaoxianzu Autonomous Prefecture, Antu County, Changbaishan, 42.0867°N, 128.0745°E, alt. ca. 1600 m, on twigs of Picea jezoensis var. komarovii (Pinaceae), 14 Jun. 2024, C.L. Hou, L. Zhuo, and Y. Gao, HOU 2211 (
Known only from Jilin Province, China.
Wang et al. (2017) cited the immature specimen of Tryblidiopsis sp. (HOU 662) on Picea jezoensis (Siebold & Zucc.) Carrière collected from Jilin Province, Changbaishan. In the context of the present study, we returned to this original collection site and successfully collected the mature specimens HOU 2210 and HOU 2211. The nrITS similarity between the newly collected specimens and HOU 662 is 98%. Furthermore, phylogenetic analysis shows that the newly collected specimens and specimen HOU 662 cluster together. These results indicate that the newly collected specimens HOU 2210 and HOU 2211 are the same species as specimen HOU 662.
The sequences of Try. changbaishanensis form a sister clade with the sequences of Try. pinastri and Try. sinensis. Tryblidiopsis changbaishanensis differs from Try. pinastri by having aseptate ascospores and tips of paraphyses strongly swollen to 3–5 µm. Tryblidiopsis changbaishanensis differs from Try. sinensis by having curved ascospores and a melanized basal Covering stroma between the subhymenium and the internal matrix of Covering stroma.
Melano- (Greek), referring to the melanized basal Covering stroma between the subhymenium and the internal matrix of the Covering stroma.
This new species is similar to Tryblidiopsis sichuanensis, but differs by a melanized basal Covering stroma between the subhymenium and an internal matrix of the Covering stroma, and an internal matrix filled with crystals.
CHINA, Yunnan Province, Lijiang, Laojunshan, 26.6452°N, 99.7838°E, alt. ca. 3290 m, on twigs of Picea likiangensis (Franch.) E. Pritz. (Pinaceae), 17 Aug. 2023, C.L. Hou, L. Zhuo, and S.Y. Zhao, HOU 2105 (
Ascomata on twigs, erumpent from the bark, scattered or aggregated in groups of three to five ascomata, not associated with pale areas. In surface view, ascomata round to elliptical, 1000–1150 × 800–1000 µm, as seen from the side 900–1200 µm high, black (#000000), opening by irregular splits to expose a yellow (#ffe562) hymenium. Lips absent. In median vertical section, covering stroma 50–110 μm thick near the center of ascomata, consisting of an outer layer of carbonized, angular to globose cells and an inner layer of hyaline, angular to globose cells. Basal Covering stroma 15–25 µm thick, located between the subhymenium and the internal matrix of the Covering stroma, consisting of brown to dark brown, globose cells. Internal matrix of the Covering stroma well-developed, consisting of hyaline, thin-walled, gelatinous cells and hyaline hyphae, filled with irregular crystals. Subhymenium 10–20 µm thick, consisting of hyaline, angular to globose cells. Paraphyses aseptate, filiform, not branched, slightly swollen at tips, 135–165 × 1 µm. Asci ripening sequentially, clavate, apex obtuse, 120–150 × 15–18 µm, thin-walled, J–, 8-spored. Ascospores 1-septate, fusiform, 20–25 × 3–4 μm, hyaline, covered by a ca. 2 µm thick gelatinous sheath.
Conidiomata and zone lines not seen.
CHINA, Yunnan Province, Lijiang, Laojunshan, 26.6452°N, 99.7838°E, alt. ca. 3290 m, on twigs of Picea likiangensis (Pinaceae), 26 Jul. 2024, C.L. Hou, L. Zhuo, and X.N. Sui, HOU 2307 (
Known only from Yunnan Province, China.
The multi-locus gene analysis indicates that the sequences of Tryblidiopsis melanostroma form a well-supported clade sister to the sequences of Try. sichuanensis. Tryblidiopsis melanostroma is morphologically similar to Try. sichuanensis, but the latter has an internal matrix of Covering stroma without crystals and lacks a melanized basal Covering stroma between the subhymenium and the internal matrix of the Covering stroma. Interestingly, a similar melanization phenomenon has been observed in Try. magnesii, where the inner wall of the covering stroma is melanized (Magnes 1997;
Tryblidiopsis melanostroma on Picea likiangensis (HOU 2105/
Referring to ascospores with3–6 septae.
This new species is distinguished from other Tryblidiopsis species by its 4-spored asci and 3–6-septate ascospores.
CHINA, Yunnan Province, Lijiang, Laojunshan, 26.6452°N, 99.7838°E, alt. ca. 3290 m, on twigs of Picea likiangensis (Pinaceae), 17 Aug. 2023, C.L. Hou, L. Zhuo, and S.Y. Zhao, HOU 2107 (
Ascomata on twigs, erumpent from the bark, scattered, not associated with pale areas. In surface view, ascomata subround to elliptical, 1500–2200 × 1100–1400 µm, as seen from the side 600–800 µm high, black (#000000), opening by irregular splits to expose a dark gray (#373737) hymenium. Lips absent. In median vertical section, covering stroma 35–60 μm thick near the center of ascomata, consisting of an outer layer of carbonized, angular to globose cells and an inner layer of hyaline, angular to globose cells. Basal Covering stroma absent. Internal matrix of the Covering stroma well-developed, consisting of hyaline hyphae, filled with irregular crystals. Subhymenium 25–35 µm thick, consisting of hyaline, angular to globose cells. Paraphyses aseptate, filiform, not branched, slightly swollen at tips, 160–185 × 1 µm, covered by a ca. 1 µm thick gelatinous sheath. Asci ripening sequentially, clavate, apex obtuse, 120–150 × 18–25 µm, thin-walled, J–, 4-spored, no aborted ascospores were observed. Ascospores 3–6-septate, rod-shape, tapering to narrow base, 40–50 × 4–6 μm, hyaline, covered by a 2–3 µm thick gelatinous sheath.
Conidiomata and zone lines not seen.
CHINA, Yunnan Province, Lijiang, Laojunshan, 26.6452°N, 99.7838°E, alt. ca. 3290 m, on twigs of Picea likiangensis (Pinaceae), 17 Aug. 2023, C.L. Hou, L. Zhuo, and S.Y. Zhao, HOU 2104 (
Known only from Yunnan Province, China.
The phylogenetic analysis shows that sequences of this new species form a separate clade and cluster with sequences of Try. changbaishanensis, Try. magnesii, Try. melanostroma, Try. pinastri, Try. sichuanensis, and Try. sinensis. Morphologically, Try. multiseptata can be distinguished from other Tryblidiopsis species by its 4-spored asci and 3–6-septate ascospores.
Referring to the name of the province (Yunnan) where the specimen was collected.
This new species is distinguished from other Tryblidiopsis species by its filiform ascospores each with 1–3-septa, and occurrence on a non-Picea host.
CHINA, Yunnan Province, Lijiang, Laojunshan, alt. ca. 3200 m, on twigs of Tsuga chinensis (Franch.) Pritz. (Pinaceae), 11 Jul. 2007, C.L. Hou, HOU 487 (
Ascomata on twigs, erumpent from the bark, scattered, not associated with pale areas. In surface view, ascomata round to irregular, 800–1100 µm, as seen from the side 350–550 µm high, black (#000000), opening by irregular splits to expose a pale yellow hymenium. Lips absent. In median vertical section, covering stroma 70–100 μm thick near the center of ascomata, consisting of an outer layer of carbonized, angular to globose cells, and an inner layer of hyaline, angular to globose cells. Basal Covering stroma absent. Internal matrix of Covering stroma well-developed, consisting of hyaline hyphae and angular to globose cells. Subhymenium 20–40 µm thick, consisting of textura intricata and hyaline, angular to globose cells. Paraphyses aseptate, filiform, not branched, curved, sightly swollen at tips, 110–160 × 2–2.5 µm, covered by a thin gelatinous sheath. Asci ripening sequentially, clavate, apex obtuse, 90–135 × 11–18 µm, thin-walled, J–, 8-spored. Ascospores 1–3-septate, filiform, tapering at both ends, 45–90 × 2–4 μm, hyaline, covered by a thin gelatinous sheath.
Conidiomata and zone lines not seen.
CHINA, Yunnan Province, Lijiang, Xinzhu village, alt. ca. 2400 m, on twigs of Tsuga chinensis (Pinaceae), 20 Jul. 2013, C.L. Hou, HOU 1116B (
Known only from Yunnan Province, China.
Wang et al. (2017) indicated that Tryblidiopsis species are host-specific and grow only on Picea spp., but the new species Try. yunnanensis grows on Tsuga chinensis. Four species of Rhytismataceae are known from Tsuga spp, namely Coccomyces heterophyllae A. Funk, Coccomyces mertensianae Sherwood, Discocainia treleasei (Sacc.) J. Reid & A. Funk, and Therrya tsugae. However, for none of them molecular sequence data are available. Morphologically, Co. heterophyllae, Co. mertensianae, and D. treleasei differ from Try. yunnanensis by aseptate ascospores, and Th. tsugae differs from Try. yunnanensis by ascomata opening by a single longitudinal split. Usually, Tryblidiopsis spp. have fusiform to clavate ascospores and more or less stalked ascomata, whereas Try. yunnanensis has filiform ascospores and sessile ascomata. Sequence similarities of ITS rDNA between Try. yunnanensis and other sequences of Tryblidiopsis species are 86.63%–92.61%, and nrLSU rDNA are 91.16%–97.72%. Based on the differences of ascomata, ascospores, host and sequence similarities, it seems that a new genus should be erected to accommodate this species. To avoid establishing too many genera, however, we tentatively assign this species to Tryblidiopsis.
CHINA, Sichuan Province, Xiaojin County, Jiajinshan, on twigs of Picea sp. (Pinaceae), 25 Jul. 2006, C.L. Hou, HOU 288 (
In the multigene phylogenetic analysis, the sequence of the specimen HOU 288 forms a distinct clade closely related to the sequence of Try. melanostroma and Try. sichuanensis. The ITS rDNA sequence similarity of this specimens and these two species is 97%. Because the specimen is immature, it is labelled as Tryblidiopsis sp. 1.
CHINA, Heilongjiang, Mudanjiang, Jingpohu National Scenic Area, on twigs of Picea sp. (Pinaceae), 5 Aug. 2011, C.L. Hou, HOU 956 (
In the multigene phylogenetic analysis, the sequence of this specimen clusters with the sequences of Try. changbaishanensis. The ITS rDNA sequence similarity of HOU 956 and Try. changbaishanensis is 97%. Unfortunately, no mature ascomata of this specimen have been obtained, so specimen HOU 956 is labelled as Tryblidiopsis sp. 2.
Morphology of ascospores should not be used as a sole criterion for distinguishing between genera of Rhytismatales. The study by
Species of Neotherrya form a distinct clade with high support in the phylogenetic tree. The species within this genus exhibit considerable morphological variability, concerning ascospore shape, the number of septa in ascospores, and the number of spores in each ascus. These differences make it impossible to classify species in Neotherrya based solely on morphological traits. The ITS sequence similarity among species within this genus also varies significantly, ranging from 87.01% to 95.66%. While there is no universally accepted threshold for ITS sequence divergence, Vu et al. (2019) proposed a genus-level threshold of 94.3% for ITS sequences, which further emphasizes the variability in Neotherrya ITS sequences. Because the nrITS region can be quite variable, the more conserved nrLSU region is often used to resolve relationships at higher taxonomic levels (
Four of the five species of Neotherrya were collected on Laojunshan in Yunnan, part of the Hengduan Mountains, a region known for its high diversity of conifer species. The concentration of species highlights the rich fungal diversity in this region, which may be due to unique environmental conditions, niche specialization, or co-evolution with the host conifers.
The significant differences in ITS sequences’ similarity among species suggest there may be undiscovered species in genus Therrya. This points to the need to further explore the Hengduan Mountains to uncover hidden biodiversity. Future studies should focus on collecting more specimens and analyzing a wider range of genetic markers to better understand the species boundaries and evolutionary relationships in these taxa.
Some taxa within the order Rhytismatales exhibit strong host specificity. In the study by
1 | Cell wall of ascospores reacts opaque dark blue to dark purple in iodine-based reagents | Pseudographis (19) |
– | Cell wall of ascospores does not reacts opaque dark blue to dark purple in iodine-based reagents | 2 |
2 | Ascospores muriform | Triblidium (Tri. sherwoodiae) |
– | Ascospores not muriform | 3 |
3 | Ascomata stipitate | 4 |
– | Ascomata sessile | 5 |
4 | Ascospores with gelatinous sheath | Tryblidiopsis (20) |
– | Ascospores without gelatinous sheath | Stipamyces (27) |
5 | Ascomata round or irregular | 6 |
– | Ascomata elliptical or elongate | 13 |
6 | Ascospores elliptical | Zeus (Z. olympius) |
– | Ascospores not elliptical | 7 |
7 | Basal Covering stroma absent | Pseudococcomyces (P. yunnanensis) |
– | Basal Covering stroma present | 8 |
8 | Ascomata growing on Juniperus twigs | Cryptococcomyces (28) |
– | Ascomata growing on twigs of other hosts | 10 |
9 | Paraphyses coiled or bent at tips | Discocainia (D. treleasei) |
– | Paraphyses not coiled at tips | 11 |
10 | Ascal apex usually rounded or acute; ascospores generally aseptate | Coccomyces (32) |
– | Ascal apex usually obtuse | 12 |
11 | Internal matrix of Covering stroma consisting of hyaline hyphae; ascospores cylindrical | Neotherrya (44) |
– | Internal matrix of Covering stroma consisting of globoes or angular cells; ascospores fusiform | 12 |
12 | Paraphyses not swollen at tips | Abiomyces (A. laojunshanensis) |
– | Paraphyses usually swollen at tips | Therrya (49) |
13 | Ascomata elliptical or elongate, often curved, sometimes branched, often parasitic on living twigs or branches | Colpoma (55) |
– | Ascomata elliptical to broadly elliptical | 14 |
14 | Lips present | 15 |
– | Lips absent | 18 |
15 | Ascomata develop a darkened lower wall at an early stage in ascomatal development, before the hymenium is differentiated, and before a darkened upper wall has developed | Bivallium (61) |
– | Ascomata with simultaneous development of darkened upper and lower walls or darkened upper wall develops first | 16 |
16 | Ascomata elliptical or cylindrical | Hypoderma (62) |
– | Ascospores filiform | 17 |
17 | Lips creamy white; asci rostrate at apex at maturity | Labivalidus (64) |
– | Lips other colors; asci round or subacute at apex | Lophodermium (65) |
18 | Ascospores 0–1 septate | Hypohelion (Hy. shennongjianum) |
– | Ascospores 3 septate | Xyloschizon (X. weirianum) |
19 | Ascospores muriform, broadly elliptical | Pseudographis elatina |
– | Ascospores phragmosporous, elongate | Pseudographis pinicola |
20 | Asci 4-spored | Tryblidiopsis multiseptata |
– | Asci 8-spored | 21 |
21 | Ascospores 1–3 septate | Tryblidiopsis yunnanensis |
– | Ascospores 0–1 septate | 22 |
22 | Melanized layer between the subhymenium and internal matrix of Covering stroma | 23 |
– | No melanized layer between the subhymenium and internal matrix of Covering stroma | 24 |
23 | Tips of paraphyses strongly swollen 3–5 µm | Tryblidiopsis changbaishanensis |
– | Tips of paraphyses only slightly swollen | Tryblidiopsis melanostroma |
24 | Gelatinous sheaths of ascospores with extended hyaline appendages at apex and base | Tryblidiopsis sinensis |
– | Gelatinous sheaths of ascospores without appendages at apex and base | 25 |
25 | Melanized inner layer of the covering stroma | Tryblidiopsis magnesii |
– | No melanized inner layer of the covering stroma | 26 |
26 | Multilocular conidiomata | Tryblidiopsis sichuanensis |
– | Unilocular conidiomata | Tryblidiopsis pinastri |
27 | Ascomata with longer stalks, paraphyses branched at tips | Stipamyces massonianae |
– | Ascomata with shorter stalks, paraphyses not branched at tips | Stipamyces pinicola |
28 | Paraphyses coiled or bent at tips | 29 |
– | Paraphyses not coiled at tips | 31 |
29 | Basal Covering stroma absent | Cryptococcomyces niger |
– | Basal Covering stroma present | 30 |
30 | Internal matrix of Covering stroma consisting of crystals; consistent gelatinous sheaths consistency of ascospores | Cryptococcomyces carbostomaticus |
– | Internal matrix of Covering stroma without crystals; different gelatinous sheaths consistency of ascospores at apex | Cryptococcomyces juniperi |
31 | Ascospores each with gelatinous caps | Cryptococcomyces crystallinus |
– | Ascospores without gelatinous caps | Cryptococcomyces occultus |
32 | Branched, netlike interwoven hyaline periphysoids immersed in a gel lined on the inside ofcovering layer | Coccomyces irretitus |
– | Netlike interwoven hyaline periphysoids absent | 33 |
33 | Ascospores 7–8 septate | Coccomyces villaevicosae |
– | Ascospores aseptate | 34 |
34 | Basal Covering stroma absent or poorly developed | 35 |
– | Basal Covering stroma well developed | 39 |
35 | Covering stroma barely carbonized on the exterior | Coccomyces heterophyllae |
– | Covering stroma strongly carbonized on the exterior | 36 |
36 | Inner layer of covering stroma composed of interwoven hyphae embedded in a brown gelatinous matrix | Coccomyces mertensianae |
– | Inner layer of covering stroma not composed of interwoven hyphae | 37 |
37 | Paraphyses embedded in gel, area in the upper part of the asci with brown globose granules, which turn bright olive green after the addition of KOH | Coccomyces pumilio |
– | Paraphyses not embedded in gel, without globose granules | 38 |
38 | Paraphyses branched, subhymenium faintly brown | Coccomyces parvulus |
– | Paraphyses not branched; subhymenium hyaline | Coccomyces petersii |
39 | Paraphyses septate | 40 |
– | Paraphyses aseptate | 41 |
40 | Paraphyses partly recurved at the tips and nodose | Coccomyces pseudotsugae |
– | Paraphyses not recurved at the tips or nodose | Coccomyces lijiangensis |
41 | Internal matrix of Covering stroma thick, up to 500 μm | Coccomyces papillatus |
– | Internal matrix of Covering stroma thin | 42 |
42 | Ascospores fusiform | Coccomyces atactus |
– | Ascospores filiform | 43 |
43 | Paraphyses branched, enlarged to 3 μm at apex | Coccomyces bipartitus |
– | Paraphyses not branched, weakly circinate, enlarged to 2–3 μm at apex | Coccomyces cembrae |
44 | Ascospores septate | 45 |
– | Ascospores aseptate | 46 |
45 | Ascospores fusiform, 30–50 × 2.5–4.5 μm | Neotherrya abieticola |
– | Ascospores cylindrical, 65–100 × 2–3 μm | Neotherrya pinicola |
46 | Ascospores 1–3-septate, usually 3-septate, nematode-like | Neotherrya nematoidea |
– | Ascospores more than 3-septate, cylindrical | 47 |
47 | Ascospores covered by a 2–3 µm thick gelatinous sheath; paraphyses curled and coiled at tips | Neotherrya circinata |
– | Ascospores without gelatinous sheath; paraphyses swollen to 2–3 µm at tips | Neotherrya catilliformis |
48 | Ascospores aseptate | 49 |
– | Ascospores septate | 51 |
49 | Ascospores filiform-clavate | Therrya strobi |
– | Ascospores narrowly fusiform or fusiform | 50 |
50 | Ascospores with a funnel shaped appendage at both ends, 16–18 × 2 μm | Therrya pinicola |
– | Ascospores without appendage, 21–45 × 1.6–2.8 μm | Therrya guizhouensis |
51 | Asci 4-spored; ascospores 8–12-celled | Therrya fuckelii |
– | Asci 8-spored; ascospores ≤ 8 cells | 52 |
52 | Ascospores broadly fusiform to clavate | Therrya piceae |
– | Ascospores narrowly fusiform or acicula | 53 |
53 | Asci acutely rounded at the apex | Therrya pseudotsugae |
– | Asci blunt or obtuse at the apex | 54 |
54 | Ascomata 1.5 to 3 mm wide, opening by means of longitudinal fissures or irregular lobes; ascospores at first single-celled, later becoming 4- to 8-celled | Therrya pini |
– | Ascomata 600 μm × 300 μm, opening by a longitudinal split; ascospores 2- to 4-septate | Therrya tsugae |
55 | Ascospores septate | 56 |
– | Ascospores aseptate | 57 |
56 | Ascospores broad-elliptic to oval | Colpoma agathidis |
– | Ascospores fili-fusiform | Colpoma intermedium |
57 | The internal matrix consisting of brown hyphae; the slit flanked by a dense fringe of colorless gelatinous branched hyphae | Colpoma densta |
– | The internal matrix absent | 58 |
58 | A wider and rather complex region layered and branched region near the split lined with pale lip cells | Colpoma crispum |
– | No such structure at the split of the covering stroma | 59 |
59 | Ascospores short, ≤ 35 μm | Colpoma pseudographioides |
– | Ascospores long, ≥ 70 μm | 60 |
60 | Ascomata densely scattered, with a margin that is white or whitish-gray crenate, black, with an ellipsoid to subrotund or irregularly elongated and flexuous disc, almost flat, gray or sub-violaceous | Colpoma serrulatum |
– | Ascomata seated on a thin black crust, irregular, elliptical or oblong, rugose, black, at length widely gaping or even suborbicular | Colpoma morbidum |
61 | Ascospores 22–27 × 6–7 μm, oblong-elliptic to fusoid-elliptic, often slightly constricted near center, nonseptate, surrounded by a 4–6 μm thick gelatinous sheath | Bivallum podocarpi |
– | Ascospores 11–13 × 4–5 μm, oblong-ellipsoidal to slightly fusiform-ellipsoidal, hyaline, aseptate, with 3–5 μm thick gelatinous sheaths | Bivallum panamense |
62 | Paraphyses sometimes branched, not swollen or slightly swollen at apex | Hypoderma cunninghamiicola |
– | Paraphyses simple, not branched or swollen | 63 |
63 | Ascospores narrow-fusoid, aseptate, slightly curved | Hypoderma abietinum |
– | Ascospores rod-like, hyaline, aseptate in early stage, becoming one-septate at maturity | Hypoderma shimanense |
64 | Paraphyses conspicuously swollen to 2–3 μm diam. at their tips; ascospores 100–125 × 3–4 μm | Labivalidus cunninghamiae |
– | Paraphyses not swollen or slightly swollen at their tips; ascospores100–125 × 3–4 μm | Labivalidus jianchuanensis |
65 | Ascomata dull to shiny, dark gray to black, subcuticular, subhymenium flat, consisting of textura angularis | Lophodermium agathidis |
– | Ascomata slightly shiny, brown, irregular intraepidermal, subhymenium depressed, consisting of textura porrecta | Lophodermium cephalotaxi |
We are grateful to the National Natural Science Foundation of China and Science & Technology Fundamental Resources Investigation Program for funding this project.
The authors have declared that no competing interests exist.
No ethical statement was reported.
This study was supported by National Natural Science Foundation of China (No. 32270012) and Science & Technology Fundamental Resources Investigation Program (Grant No. 2023FY101300).
All co-authoring participated in the discussion leading up to the first manuscript draft. The manuscript was initially drafted from these discussions by LZ and CLH. All authors commented on the draft in several rounds and provided substantial modifications. The final draft was read and approved by all authors.
Lan Zhuo https://orcid.org/0000-0002-8129-2812
Hai-Qi Wang https://orcid.org/0009-0004-3388-6263
Peng Zhang https://orcid.org/0009-0007-3113-1838
Xiao-Nan Sui https://orcid.org/0009-0005-3840-3969
Mei-Jun Guo https://orcid.org/0000-0002-8387-8147
Shi-Juan Wang https://orcid.org/0009-0004-1711-4394
Cheng-Lin Hou https://orcid.org/0000-0001-8162-5560
The fungal type materials and type strains of the new species proposed in this study were deposited at Herbarium of the College of Life Science, Capital Normal University, Beijing, China (
Supplementary table and figures
Data type: doc
Explanation note: table S1: Taxa of Rhytismatales used for the phylogenetic analysis, GenBank/UNITE accession numbers, and voucher information. The newly generated sequences in the context of the present study are indicated in bold. Notes: HOU: Collecting number; CNUCC: Isolate number; “—” sequences are not available; Species name T – Type species; Species name H – Holotype. fig. S1: Phylogenetic tree generated by ML analysis based on sequences of the ITS. Cudoniella clavus (AFTOL-ID 166) and Pezicula carpinea (KUS-F51029) were selected as outgroups. Maximum likelihood bootstrap values (MLB ≥ 70%) were shown at the nodes. fig. S2: Phylogenetic tree generated by ML analysis based on sequences of the LSU. Cudoniella clavus (AFTOL-ID 166) and Pezicula carpinea (KUS-F51029) were selected as outgroups. Maximum likelihood bootstrap values (MLB ≥ 70%) were shown at the nodes. fig. S3: Phylogenetic tree generated by ML analysis based on sequences of the mtSSU. Cudoniella clavus (AFTOL-ID 166) and Pezicula carpinea (KUS-F51029) were selected as outgroups. Maximum likelihood bootstrap values (MLB ≥ 70%) were shown at the nodes. fig. S4: Phylogenetic tree generated by ML analysis based on sequences of the LSU and mtSSU. Cudoniella clavus (AFTOL-ID 166) and Pezicula carpinea (KUS-F51029) were selected as outgroups. Maximum likelihood bootstrap values (MLB ≥ 70%) were shown at the nodes.