Research Article |
Corresponding author: Yong Li ( lylx@caf.ac.cn ) Academic editor: Yasmina Marin-Felix
© 2025 Ning Jiang, Han Xue, Yong Li.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Jiang N, Xue H, Li Y (2025) Species diversity of Pseudoplagiostoma and Pyrispora (Diaporthales) from Fagaceae hosts in China. IMA Fungus 16: e153782. https://doi.org/10.3897/imafungus.16.153782
|
Diaporthales is an important fungal order comprising plant-associated pathogens, endophytes, and saprobes in commercial crops and forest trees. Over the past decades, utilizing multiple gene phylogeny has substantially advanced our understanding of taxonomic relationships within this order, leading to the recognition of 35 morphologically and molecularly well-supported families. Among these, Pseudoplagiostoma (Pseudoplagiostomataceae) and Pyrispora (Pyrisporaceae) form two phylogenetically closely related lineages that exhibit distinct morphological characteristics. In this study, we conducted comprehensive morphological and phylogenetic analyses of fungal specimens associated with Fagaceae hosts and proposed four new species and two new combinations: Ps. fagaceaearum sp. nov., Ps. neocastanopsidis sp. nov., Ps. quercus sp. nov., Py. humilis comb. nov., Py. myracrodruonis comb. nov., and Py. quercicola sp. nov. Furthermore, based on detailed morphological comparisons and molecular evidence, we synonymized Neoplagiostoma with Pyrispora, Ps. castaneae and N. castaneae with Py. castaneae, Ps. ilicis with Ps. wuyishanense and Ps. diaoluoshanense with Ps. mangiferae. This study provides substantial morphological and molecular data that significantly contribute to our understanding of Pseudoplagiostomataceae and Pyrisporaceae, thereby establishing a robust foundation for future taxonomic revisions and systematic investigations within Diaporthales. The findings not only expand our knowledge of fungal diversity associated with Fagaceae but also enhance our comprehension of evolutionary relationships within these important fungal families.
Ascomycota, molecular phylogeny, Sordariomycetes, systematics, taxonomy
The fungal order Diaporthales represents a monophyletic group within Sordariomycetes (Ascomycota). Morphologically, members of Diaporthales are characterized by their teleomorphic features, which include solitary or aggregated, immersed or erumpent, orange, brown, or black perithecial ascomata in stromatic tissues or substrates, often with a defined centrum; unitunicate asci with a prominent refractive ring; short to elongate, aseptate or septate, hyaline or pigmented ascospores (
The family Pseudoplagiostomataceae, containing a sole genus Pseudoplagiostoma, was originally established by
The family Pyrisporaceae, currently comprising a single genus Pyrispora with its type species P. castaneae, was established based on a leaf-inhabiting fungus isolated from Castanea mollissima in China (
Morphologically, members of Pseudoplagiostomataceae share several characteristics with Gnomoniaceae in their teleomorphic stage, particularly in possessing solitary, immersed, non-stromatic ascomata with lateral beaks, asci featuring distinct apical rings, and 1-septate ascospores (
In this study, we investigated fungal pathogens associated with Fagaceae, a crucial plant family widely distributed in China. We specifically collected diseased leaf samples to isolate and identify fungal strains belonging to the genera Pseudoplagiostoma and Pyrispora. The primary objectives of this research are: (1) to elucidate the species diversity of these two diaporthalean genera associated with Fagaceae hosts, and (2) to clarify and refine the taxonomic concepts of Pseudoplagiostoma and Pyrispora through comprehensive morphological and molecular analyses.
Leaves of various Fagaceae hosts including Castanopsis carlesii, Ca. choboensis, Ca. patelliformis, Cyclobalanopsis patelliformis, Quercus aliena, Q. engleriana, and Q. variabilis with leaf spots were collected across Anhui, Guizhou, Hainan, and Henan Provinces in China in 2019. The sampled leaves were transported to the laboratory in paper bags for fungal isolation. Initially, the leaves were rinsed with tap water to remove surface debris and dried using sterilized absorbent cotton. Subsequently, the samples were surface disinfected by immersing them in 95% ethanol for 10 seconds, 10% NaOCl for 2 minutes, 70% ethanol for 2 minutes, followed by rinsing in distilled water for 2 minutes and drying again with sterilized absorbent cotton. The leaves were then aseptically cut into 0.5 × 0.5 cm pieces using a sterile double-edged blade. Pieces containing both diseased and healthy tissues were transferred onto the potato dextrose agar (PDA; containing 200 g potatoes, 20 g dextrose, and 20 g agar per liter) and incubated at 25 °C to obtain pure fungal cultures. Dried cultures such as the fungarium specimens were deposited in the herbarium of the
Chinese Academy of Forestry (
The isolates obtained in this study were subcultured on PDA, malt extract agar (MEA; 30 g malt extract, 5 g mycological peptone, 15 g agar per liter), and synthetic nutrient agar (SNA; 0.2 g glucose, 0.2 g sucrose, 1 g potassium dihydrogen phosphate, 1 g potassium nitrate, 0.25 g magnesium sulfate anhydrous, 0.5 g potassium chloride, 14 g agar per liter) plates to induce the formation of fruiting bodies. Colony characteristics were observed and documented.
Fungal genomic DNA was extracted from colonies cultivated on PDA plates for 10 days using the Wizard® Genomic DNA Purification Kit (Promega, Madison, WI, USA), adhering to the manufacturer’s instructions. Five loci were targeted for amplification: the internal transcribed spacer (ITS) region, the large subunit nrDNA (LSU), the DNA-directed RNA polymerase II second largest subunit (RPB2), the translation elongation factor 1-alpha (TEF1-α), and the partial beta-tubulin (TUB2) genes. The primer pairs used for amplification were ITS1/ITS4 for ITS, LR0R/LR5 for LSU, RPB2-5F/fRPB2-7cR for RPB2, EF1-728F/EF1-986R or EF1-728F/EF2 for TEF1-α, and Bt2a/Bt2b for TUB2 (
Phylogenetic analyses were performed on the concatenated dataset of the five loci using both Maximum Likelihood (ML) and Bayesian Inference (BI) approaches. For the ML analysis, the GTR substitution model was employed, and 1000 bootstrap replicates were conducted through the CIPRES Science Gateway portal (https://www.phylo.org/;
The pairwise homoplasy index (PHI) test was performed using the SplitsTree App to assess potential recombination events among closely related phylogenetic species (
The concatenated dataset of ITS, LSU, RPB2, TEF1-α, and TUB2 included 82 strains, encompassing a total of 3,230 characters (ITS: 1-553; LSU: 554-1,349; RPB2: 1,350-2,207; TEF1-α: 2,208-2,720; TUB2: 2,721-3,230), with gaps included. The maximum likelihood (ML) analysis yielded an optimization likelihood value of -24659.30 for the best RAxML tree, with the alignment matrix containing 1,328 distinct patterns and 20.21% undetermined characters or gaps. The estimated nucleotide frequencies were as follows: A = 0.232135, C = 0.269862, G = 0.265440, and T = 0.232563. The substitution rates were calculated as AC = 2.097626, AG = 4.485069, AT = 1.996030, CG = 1.192343, CT = 8.147705, and GT = 1.0. The gamma distribution shape parameter (α) was estimated at 0.220442. For Bayesian inference (BI) analysis, the most suitable evolutionary models for each locus were determined using MrModeltest, with SYM+I+G4 selected for ITS, TNe+R2 for LSU, TIM3e+I+G4 for RPB2, TPM2+F+I+G4 for TEF1-α, and HKY+F+I+G4 for TUB2. The BI results were consistent with the ML tree topology. Branches in Fig.
Phylogram of Pseudoplagiostoma and Pyrispora resulting from a maximum likelihood analysis based on the ITS, LSU, RPB2, TEF1-α and TUB2 gene loci. Numbers above the branches indicate ML bootstrap values (left, ML BS ≥ 70%) and Bayesian posterior probabilities (right, BPP ≥ 0.95). Ex-type strains are marked with *.
To validate species delineation within Pseudoplagiostoma and Pyrispora, PHI analysis was conducted. Two clades, comprising both established and newly proposed species, were selected for testing: Clade A included Ps. castanopsidis, Ps. jasmini, Ps. jianfenglingense, Ps. fagacearum, Ps. neocastanopsidis, and Ps. quercus, while Clade B comprised Py. castaneae, Py. humilis, Py. myracrodruonis, and Py. quercicola. The PHI test revealed no significant evidence of genetic recombination within these clades (Clade A, p = 1.0; Clade B, p = 1.0; Fig.
Named after the host family, Fagaceae.
Distinct from Ps. castanopsidis by longer conidia; and from Ps. jasmini, Ps. jianfenglingense, Ps. neocastanopsidis and Ps. quercus by wider conidia.
CHINA • Guizhou Province, Zunyi City, Suiyang County, Kuankuoshui Natural Reserve, on diseased leaves of Quercus engleriana, 23 November 2019, Dan-ran Bian (holotype CAF800039; ex-type culture CFCC 54425).
Conidiomata pycnidial, solitary, erumpent, globose to pulvinate, brown, 400–750 μm diam., exuding a brown conidial mass. Conidiophores indistinct, often reduced to conidiogenous cells. Conidiogenous cells hyaline, smooth, lageniform to ampulliform, attenuate towards the apex, phialidic, 13.5–18.5 × 4–5.5 μm. Conidia holoblastic, aseptate, hyaline, smooth, thick-walled, multi-guttulate, ellipsoid, oblong-cylindrical, slightly constricted at the middle, slightly curved, base tapering to a flat protruding scar, (18–)18.5–21(–22.5) × (10.5–)11–13(–14) μm (n = 50), L/W = 1.4–2.1, with a prominent hilum.
Colonies on PDA flat, spreading, with flocculent aerial mycelia and floccose margin, vinaceous buff, reaching 90 mm diam. after 1 week at 25 °C, forming brown conidiomata with brown conidial masses. Colonies on MEA flat, dense, surface folded, with moderate flocculent aerial mycelia and even margin, lavender gray to buff, reaching 70 mm diam. after 2 weeks at 25 °C, sterile. Colonies on SNA flat, spreading, with sparse aerial mycelia and smooth margin, white to rosy buff, reaching 70 mm diam. after 2 weeks at 25 °C, sterile.
CHINA • Guizhou Province, Zunyi City, Suiyang County, Kuankuoshui Natural Reserve, on diseased leaves of Quercus engleriana, 23 November 2019, Dan-ran Bian (cultures CFCC 54446 and CFCC 54410); • Guizhou Province, Zunyi City, Honghuagang District, Zunyi Normal University, on diseased leaves of Castanopsis choboensis, 24 November 2019, Shang Sun (culture CFCC 54449); • Hainan Province, Changjiang Li Autonomous County, Bawangling National Forest Park, on diseased leaves of Cyclobalanopsis patelliformis, 30 March 2019, Yong Li (culture CFCC 54393).
China, Guizhou and Hainan Provinces.
Associated with leaf spot disease of Castanopsis choboensis, Cyclobalanopsis patelliformis and Quercus engleriana.
Five isolates obtained from leaf spots of Castanopsis choboensis, Cyclobalanopsis patelliformis, and Quercus engleriana formed a well-supported clade, which is newly described here as Pseudoplagiostoma fagacearum. This species is phylogenetically closely related to Ps. castanopsidis, Ps. jasmini, Ps. jianfenglingense, Ps. neocastanopsidis and Ps. quercus (Fig.
Conidiomata pycnidial, solitary, erumpent, globose, dark brown, 150–400 μm diam., exuding a dark conidial mass. Conidiophores indistinct, often reduced to conidiogenous cells. Conidiogenous cells hyaline, smooth, lageniform to ampulliform, phialidic, 11–26 × 4–6.5 μm. Conidia holoblastic, aseptate, hyaline, smooth, thick-walled, multi-guttulate, ellipsoid, oblong-cylindrical, slightly constricted at the middle, slightly curved, base tapering to a flat protruding scar, (16.5–)17.5–19.5(–20.5) × (10.5–)11–12.5(–13) μm (n = 50), L/W = 1.4–1.8, with a prominent hilum.
Colonies on PDA flat, spreading, with flocculent aerial mycelia and even margin, forming white to smoke grey circular center area and sepia outer area, fast growing, reaching 90 mm diam. after 1 week at 25 °C, forming dark brown conidiomata with dark conidial masses. Colonies on MEA flat, dense, surface folded, with abundant aerial mycelia and floccose margin, forming ochreous circular center area and white outer area, reaching 80 mm diam. after 2 weeks at 25 °C, sterile. Colonies on SNA flat, spreading, with sparse aerial mycelia and undulating margin, cinnamon, slowly growing, reaching 70 mm diam. after 3 weeks at 25 °C, sterile.
CHINA • Hainan Province, Changjiang Li Autonomous County, Bawangling National Forest Park, on diseased leaves of Cyclobalanopsis patelliformis, 30 March 2019, Yong Li (CAF800038; cultures CFCC 54396 and CFCC 55894).
China, Hainan Province.
Associated with leaf spot disease of Cyclobalanopsis patelliformis.
Two isolates obtained from leaf spots of Cyclobalanopsis patelliformis formed a well-supported clade with two isolates of Pseudoplagiostoma jianfenglingense from unknown leaves (Fig.
Pseudoplagiostoma diaoluoshanense Zhao X. Zhang & X.G. Zhang
See
China, Hainan and Yunnan Provinces.
Associated with leaf blight disease of Mangifera hosts.
Pseudoplagiostoma mangiferae was first described from Yunnan Province, China, where it was found associated with leaf blight symptoms on Mangifera sp. (
Name refers to its closest relative, Pseudoplagiostoma castanopsidis.
Distinct from its phylogenetically related species of Ps. castanopsidis and Ps. jasmini by wider conidiogenous cells.
CHINA • Hainan Province, Changjiang Li Autonomous County, Bawangling National Forest Park, on diseased leaves of Castanopsis carlesii, 30 March 2019, Yong Li (holotype CAF800037; ex-type culture CFCC 54447).
Conidiomata pycnidial, solitary, erumpent, globose to pulvinate, brown, 300–700 μm diam., exuding an orange conidial mass. Conidiophores indistinct, often reduced to conidiogenous cells. Conidiogenous cells hyaline, smooth, lageniform to ampulliform, attenuate towards the apex, phialidic, 11.5–22 × 3.5–6.5 μm. Conidia holoblastic, aseptate, hyaline, smooth, thick-walled, multi-guttulate, ellipsoid, oblong-cylindrical, slightly constricted at the middle, slightly curved, base tapering to a flat protruding scar, (18.5–)19–22(–24) × (8.5–)9–10(–10.5) μm (n = 50), L/W = 1.8–2.7, with a prominent hilum.
Colonies on PDA flat, spreading, with abundant aerial mycelia and even margin, forming pale luteous center area, white middle area and smoke grey outer area, fast growing, reaching 90 mm diam. after 1 week at 25 °C, forming brown conidiomata with orange conidial masses. Colonies on MEA flat, spreading, with flocculent aerial mycelia and undulating margin, white to saffron, fast growing, reaching 90 mm diam. after 1 week at 25 °C, sterile. Colonies on SNA flat, spreading, with sparse aerial mycelia and feathery margin, pale luteous to orange, slowly growing, reaching 70 mm diam. after 3 weeks at 25 °C, sterile.
CHINA • Hainan Province, Changjiang Li Autonomous County, Bawangling National Forest Park, on diseased leaves of Castanopsis carlesii, 30 March 2019, Yong Li (culture CFCC 52809).
China, Hainan Province.
Associated with leaf spot disease of Castanopsis carlesii.
Two isolates from leaf spots of Castanopsis carlesii clustered in a well-supported clade here newly described as Pseudoplagiostoma neocastanopsidis, which is phylogenetically close to Ps. castanopsidis and Ps. jasmini (Fig.
Distinct from its closely related species of Ps. jianfenglingense by sequence data.
CHINA • Henan Province, Xinyang City, Pingqiao District, Haotang Village, on diseased leaves of Quercus aliena, 7 August 2019, Yong Li (holotype CAF800040; ex-type culture CFCC 55232).
Conidiomata pycnidial, solitary, erumpent, globose to pulvinate, black, 300–700 μm diam., exuding a brown conidial mass. Conidiophores indistinct, often reduced to conidiogenous cells. Conidiogenous cells hyaline, smooth, ampulliform, attenuate towards the apex, phialidic, 10–25 × 2–8.5 μm. Conidia holoblastic, aseptate, hyaline, smooth, thick-walled, multi-guttulate, ellipsoid, oblong-cylindrical, slightly constricted at the middle, slightly curved, base tapering to a flat protruding scar, (16–)17–21(–21.5) × (8.5–)9.5–11(–11.5) μm (n = 50), L/W = 1.6–2.3, with a prominent hilum.
Colonies on PDA flat, spreading, with moderate aerial mycelia and smooth margin, white to smoke gray, reaching 80 mm. diam after 2 weeks at 25 °C, forming black conidiomata with brown conidial masses. Colonies on MEA flat, spreading, with sparse aerial mycelia and smooth margin, forming concentric rings, white to rosy buff, reaching 70 mm diam. after 2 weeks at 25 °C, sterile. Colonies on SNA flat, spreading, with sparse aerial mycelia and undulating margin, white to isabelline, slowly growing, reaching 70 mm diam. after 3 weeks at 25 °C, sterile.
CHINA • Henan Province, Xinyang City, Pingqiao District, Haotang Village, on diseased leaves of Quercus aliena, 7 August 2019, Yong Li (culture CFCC 55192); • Henan Province, Xinyang City, Shihe District, Boerdeng Forest Park, on diseased leaves of Quercus variabilis, 7 August 2019, Yong Li (culture CFCC 55262).
China, Henan Province.
Associated with leaf spot disease of Quercus aliena and Q. variabilis.
Three isolates obtained from leaf spots of Quercus aliena and Q. variabilis formed a well-supported clade, described here as Pseudoplagiostoma quercus, which is phylogenetically sister to Ps. jianfenglingense (Fig.
Pseudoplagiostoma ilicis T.C. Mu & J.Z. Qiu
See
China.
Associated with leaf diseases of Ilex chinensis.
Pseudoplagiostoma wuyishanense was described as a novel species inhabiting branches of an unidentified tree in Fujian Province, China, based on morphological and phylogenetic analyses (
Neoplagiostoma Z.X. Zhang & X.G. Zhang
The genus Pyrispora was introduced with Py. castaneae as its type species, isolated from Castanea mollissima in China (
Neoplagiostoma castaneae Z.X. Zhang & X.G. Zhang.
Pseudoplagiostoma castaneae T.C. Mu, J.W. Xia & X.G. Zhang.
See
China.
Associated with leaf diseases of Castanea mollissima.
Based on the evidence presented above, Neoplagiostoma castaneae and Pseudoplagiostoma castaneae should be reduced to synonyms under Pyrispora castaneae.
Pseudoplagiostoma humilis L.P.P. Magalhães, N.L.P. Sales & A. C. da Silva
See
Brazil.
Causing shoot blight and dieback of Anacardium humile.
The genus Pseudoplagiostoma is characterized by producing holoblastic, hyaline to brown, ellipsoid, unicellular, subglobose to broadly allantoid, thick-walled conidia with a prominent hilum. Although Ps. humilis was recently described in this genus based on similar anamorphic characteristics (
Pseudoplagiostoma myracrodruonis A.P.S.L. Pádua, T.G.L. Oliveira, Souza-Motta, & J.D.P. Bezerra
See
Brazil.
Endophytic in leaves of Myracrodruon urundeuva.
Based on the same phylogenetic and morphological evidence presented above, we propose the transfer of Pseudoplagiostoma myracrodruonis to the genus Pyrispora as Py. myracrodruonis comb. nov.
Distinct from Py. castaneae by the host genus.
China • Anhui Province, Hefei City, Shushan District, Dashushan Forest Park, on diseased leaves of Quercus aliena, 2 November 2019, Dan-ran Bian (holotype CAF800041; ex-type culture CFCC 54868).
Conidiomata pycnidial, solitary, erumpent, globose to pulvinate, dark brown, 200–450 μm diam., exuding a brown conidial mass. Conidiophores indistinct, usually reduced to conidiogenous cells. Conidiogenous cells hyaline, smooth, pyriform base with long neck, straight or slightly curved, unbranched, phialidic, 10.5–44 × 1–2.5 μm. Conidia holoblastic, aseptate, hyaline, smooth, multi-guttulate, ellipsoidal, straight, (10.5–)11.5–13.5(–15) × 4.5–5(–5.5) μm (n = 50), L/W = 2.1–3.3.
Colonies on PDA erumpent, spreading, with flocculent aerial mycelia and undulating margin, forming concentric rings, forming brown vinaceous center area and smoke gray to pale purplish gray outer area, reaching 90 mm diam. after 1 week at 25 °C, forming dark brown conidiomata with brown conidial masses. Colonies on MEA flat, spreading, with moderate aerial mycelia and undulating margin, forming brown circular center area and buff outer area, reaching 70 mm diam. after 2 weeks at 25 °C, sterile. Colonies on SNA flat, spreading, with sparse aerial mycelia and undulating margin, white to smoke gray, reaching 70 mm diam. after 2 weeks at 25 °C, forming dark brown conidiomata with brown conidial masses.
China • Anhui Province, Hefei City, Shushan District, Dashushan Forest Park, on diseased leaves of Quercus aliena, 2 November 2019, Dan-ran Bian (culture CFCC 54375).
China, Anhui Province.
Associated with leaf spot disease of Quercus aliena.
Two isolates from leaf spots of Quercus aliena clustered into a well-supported clade here newly described as Pyrispora quercicola, which represents the fourth species of the genus Pyrispora and the family Pyrisporaceae (Fig.
The classification of Diaporthales has undergone significant revisions over time, evolving from a system primarily based on teleomorph characteristics to a more comprehensive approach that integrates teleomorph, anamorph, and molecular phylogenetic data derived from ITS, LSU, RPB2, and TEF1-α gene sequences (
Members of Diaporthales generally exhibit strong congruence between morphological characteristics and phylogenetic relationships, particularly within several well-defined groups such as Cytosporaceae, Diaporthaceae, and Gnomoniaceae (
Recent studies have established Pseudoplagiostoma as an emerging fungal genus pathogenic to trees, primarily associated with leaf spot diseases (
Given the remarkable species diversity of Fagaceae hosts in China, which includes seven genera, Quercus exhibits a broad distribution, while Castanea mollissima is widely cultivated for its economic significance. Future research is likely to uncover additional species of Pseudoplagiostomataceae and Pyrisporaceae.
The authors have declared that no competing interests exist.
No ethical statement was reported.
All the fungal strains used in this study have been legally obtained, respecting the Convention on Biological Diversity (Rio Convention).
This study was supported by Fundamental Research Funds of
Conceptualization (NJ, HX and YL), Methodology (NJ and HX), Software (NJ), Validation (NJ), Formal analysis (NJ), Investigation (NJ and YL), Resources (NJ, HX and YL), Data Curation (NJ, HX and YL), Writing - Original draft (NJ), Writing - Review and Editing (NJ, HX and YL), Visualization (NJ), Supervision (YL), Project administration (NJ, HX and YL), Funding Acquisition (NJ, HX and YL).
Ning Jiang https://orcid.org/0000-0002-9656-8500
All of the data that support the findings of this study are available in the main text or Supplementary Information.
Species of Pseudoplagiostoma and Pyrispora and their Genbank accession numbers
Data type: pdf